result

Gene information

Detail information of AfisC2G09615

Location

Gene	Chr	Start	End	Strand
AfisC2G09615	chr2	1605076147	1605081115	+

Sequences

CDS

>AfisC2G09615
ATGACTATATTAGAGAAGAGAGGAAACAATGGATCTGGAGATATGTTTCCTATCGGAATGAGGGTTCTTGCCGTTGATGATAATCCAACTTGTTTGAAAATATTGGAGTATCTGCTAATTAAATGCCAATATCATGTTACTACAACAAATCAAGCAATAAAAGCATTAAAGATGTTGAGAGAGAACAAGGATCAATTTGATTTAATCATCAGTGATGTTCATATGCCTGATATGGATGGGTTTAAGCTCTTAGAGCTTGTGGGACTGGAGATGGATCTTCCTGTGATTATGCTGTCTGCAAATGGTGAGACCCAAGCAGTGATGAAAGGAATTACTCATGGAGCTTGCGATTATCTTATTAAACCTGTAAGAATTGAAGAACTTAAGAATATATGGCAGCATGTTATAAGAAAAAAGAAATATGAATCCAGAGATGAGAATTCTGTAGACAATAGTGAGGAATGCAACAATAATCAACTCGCGAATAGTGTGACTAAGGATGGACCATCAGATCAAAGCGTAAAACTTAATAAAAAGAGGAAAGATCAAGATGAAGAAGATGATGATGAAAATGAAGACCCATCTGCTCCGAAGAAGCAGAGAGTTGTTTGGTCAGTTGAGTTGCATAGAAAGTTTGTTACAGCTGTTAATCATCTTGGACTTGAAAAGGCTGTACCTAAACGAATACTCGATCTTATGAATGTTGAGGGTCTGACTCGAGAAAATGTTGCAAGTCATCTTCAGAAATACAGGCTCTATTTGAAAAGACTAAGTGCTGTAGCAAACCAACAAGCAAACATGGCTGCTGCTTTAAGAGGTAGAGACTCATCATATCTTCTCATGAATTCATTAGATGGATATTCAAATTTCAATTCTCTTAATGGGCCCAATTCAAGACCAATCCAAACCACCACATCTCTTCCTCGAATGACTAGCTTTACCGGGTTCGGGCATCATGGGTTTCCACGTTCTAGCAACCAAGTAATATCCTCCCAATTAGAAGCAAGCAATCATTTACTCAGTGGTTTTTCAAATAGTGAAATAAGCAATAATCATCCATCTTCTAGTCGAATACAATCTTCAACCATAGACCCTTTTGAAATTTCTTACCTAGGAGGTAACACAAGTAATGTGGCATGGAAATTTGCTAACAATCATACATCTTCTATTAATGTTGTTGACAATGTTTCTCCAGTGGTATCACAAGTGGCACAAAGTGATGATGTGATAGGTAGTGGCAATGGAAAATGTAGTTTATTGGATTTTAGAAGCATGGGAAATTTTGAATTGAGGTTTGAAGAACGGATACAAAATTCAAATACGCCGTATATGAATTCCTCAATGAGTTCTACACCAAATTTTATAAATAATAATCAAAGTATTGCAACTCCATTGCTTGCACACAACCTCAGTTCTGTTACAGATGATGTCTTGTTATTAAATGACAGCAAGTTGCCAAATGGGTTTGATGTTACTGGTTATGGAATTGATGATTTGGAAGCAAATGTTATGATAAAACCAGAGATTGAAGATTTTTCCTTACTGGATGGTGATGTAGGAGGCAGTGATCTGTTTTCTCTTGGTGTCTTATGA

Protein

Gene

>AfisC2G09615
GTCCCCTCCCATTTTTGCTGTTGCTTTGTTCCCATTTTGACTATCTTCGTTTCTCCTCAAACATTCCTTTTTATCGTCTCACATCTCTAATTTCAATCATCAATCTTTATTGCCTTTTTCAGATTCCTCCTATTTAACTTCATTTAATTCTCAGTAAATTAAGTTCATACGTCAAATTTTAGTTCTTTTTTCCTATCTTACTGCTGTTCTTGTTTTATTTTTAGTAATTCGTGTGGATTTTATCAAATGAGTCGGATTGACTTACGAAGATAGTGATTATTACTAATTTATACAAAATTTAGTGATCTACATCTTATTTATTTGGGTAAATTTGCCTTTTTTATTGGTGAACGTTTAACATAAGATGACTATATTAGAGAAGAGAGGAAACAATGGATCTGGAGATATGTTTCCTATCGGAATGAGGGTTCTTGCCGTTGATGATAATCCAACTTGTTTGAAAATATTGGAGTATCTGCTAATTAAATGCCAATATCATGGTTAGTGTGTATATATATATTCCTTTTTATTATCTGTGTTTGTCATATTTATGTTTCATTATTGGGGTGAAATGTCAAAATTATTGCTTGCTTTTGGTTGCTTTCTTAAGATTGCTATGTATGGGCCTGTTCATTTTGTTTTATTATCAGTTGAACAGTATATTATTCTAAATAGTCATATTTTCATTCGTTTTTTTTTTTTTTCTAATTTTGTAGTTACTACAACAAATCAAGCAATAAAAGCATTAAAGATGTTGAGAGAGAACAAGGATCAATTTGATTTAATCATCAGTGATGTTCATATGCCTGATATGGATGGGTTTAAGCTCTTAGAGCTTGTGGGACTGGAGATGGATCTTCCTGTGATTAGTAAGTCTATAAAATGACGAGTGATGTATTTAACATTTTAATCCTTTATCATTCATTAATATACAGGTTGTCAGCTCCTAACGAGGGAAGTGAGGTTATTTCCTTGAAGGAATTTATGTTGCATTATATATGCAAATGAAATCACCTAAAACTTGCATGTTTGTAAGCTCTACTAAATAGTCTTTACCAACTTTTGATTTACTTGTTTAGTGCATTAGATATATATTTGTTGGAAACAATAGTCTGGTACGATGGCTGAGTCGTAGACATTGTCACCCTCTTTAAGACGTTTCGCCGCTCTGCTCAGAATTGTGCAAGGTAGGCTATAAGCAGCACAGCCTTCGGGATAAAACAGCCAGAAATTATTCAACGAACCTCCGCACAAAGGCCGTTGATCAGAATTTGCACCCCTCGGTAGTAAAATATTGCTCGGTTTTTGTTTTGGAAGAGGAGTGACAGTTTTTGAAAAAAATGAGATGCAGTTCTTTCTGTTTTGTCCATTTATCAGTTAAGTAAAGGAAAAGGTAAAAAGAACGTTACTGATTTAGACGGAAAAGCTCGATTTCGAAGATTGTTAAAAAAAATTGTGCCAAAAATATAAACACCACACCAGCCCGGTCTATGTCGAGTCGATCGGCACGGGCGCATGTGTGGTGCTCATGCATGCGCTCCCTCCTCAACACAAAAGCATTGGGTGCCCAAAGGACCTAATTTAGGAGCTATTCTTTCAATAATCTCTGTGGTGTGGACTCAAGCAATAAATGCACTTATTCCAACATCTTTATTTTTAAACAATTCATAAAATAATTCCAACAATATTTGTTTAGTTAGTTGTTTTTTGATTGTGCATTGGTAAATTGTTCGGCCAAACATATACATACATACATATGGCTGTATGCATTAACTTATCTCTCATTATCTAGCTGTTTATTTATGGTAAATACAAATGAATTTAGTCAATTATTGTGGATCAGCACCACTGTTTTCCTTTAAGAACCATTGCTGTTCCTTTTTCTCATATTAACAAGCATTTATTTTTATGCCAATGTGAATTGAATACTTATAAGGTTTAGTACTTCTGATGACTGAAATGCACATGAATTTTACAGTGCTGTCTGCAAATGGTGAGACCCAAGCAGTGATGAAAGGAATTACTCATGGAGCTTGCGATTATCTTATTAAACCTGTAAGAATTGAAGAACTTAAGAATATATGGCAGCATGTTATAAGAAAAAAGAAATATGAATCCAGAGATGAGAATTCTGTAGACAATAGTGAGGAATGCAACAATAATCAACTCGCGAATAGTGTGACTAAGGATGGACCATCAGATCAAAGCGTAAAACTTAATAAAAAGAGGAAAGATCAAGATGAAGAAGATGATGATGAAAATGAAGACCCATCTGCTCCGAAGAAGCAGAGAGTTGTTTGGTCAGTTGAGTTGCATAGAAAGTTTGTTACAGCTGTTAATCATCTTGGACTTGAAAGTAAGACCATTCTACCAATTCTTTTAAACAAAAAAGTTGCAAACACTCCCATAATTACTTAGGTTATGTTCAATTAAAATACTATTCATACATAGATTAACAACAATAATAGTTGAGGTTTGGACACATTTTTTTAATAGGAAAAAGGAAATCAACCATGGTAAGATATAAGCAGTTTTCTTGCAATTTAACCTTTTGTCTATAGATGAAGAAAATACCTGAGCTGTACATGATCAGGAGTAATAGTGGTAAGCTATCTAGTTTGAGTTGTTAGATATTGTTGTTGATATCTAAGGCATACATAATTTTTAGTTTATTTTTTAATTTCAAGGAGAAAAAGGGATAAAACTTGAGCAGTTTTATTTATTTATTTATTTATTATTTATTTATTTTTTTGAGTTGCCTAAACGACTCATGCAATTATTTTGTGATATATTTACAACTAAGCATTGTAAGATAGTGGATGGTTGATTAGTAGGTGGATTATATGCACATGTTGGAGTACTAAGACAGATAACATTAGTAGTGCATAATCATAAGTTGTATGAAAAAACTATTATTATGATCGTGATGTGTTTTATTTTGTTGTGATACAGAGGCTGTACCTAAACGAATACTCGATCTTATGAATGTTGAGGGTCTGACTCGAGAAAATGTTGCAAGTCATCTTCAGGCATGACTTTCCTTTATTCATTTTAAAATTCATCCATCCTTTTGACCTTCTTTTGCTTGTGCATTTTGGTTTTTAAATAAAGGCAATTTTCTTAACGGATCTTTTTGTATACAGATTGCGGTTGGCTATAGTATAACAGTCTATTAATATTTTTGATAATGCAGAAATACAGGCTCTATTTGAAAAGACTAAGTGCTGTAGCAAACCAACAAGCAAACATGGCTGCTGCTTTAAGAGGTAGAGACTCATCATATCTTCTCATGAATTCATTAGATGGATATTCAAATTTCAATTCTCTTAATGGGCCCAATTCAAGACCAATCCAAACCACCACATCTCTTCCTCGAATGACTAGCTTTACCGGGTTCGGGCATCATGGGTTTCCACGTTCTAGCAACCAAGTAATATCCTCCCAATTAGAAGCAAGCAATCATTTACTCAGTGGTTTTTCAAATAGTGAAATAAGCAATAATCATCCATCTTCTAGTCGAATACAATCTTCAACCATAGACCCTTTTGAAATTTCTTACCTAGGAGGTAACACAAGTAATGTGGCATGGAAATTTGCTAACAATCATACATCTTCTATTAATGTTGTTGACAATGTTTCTCCAGTGGTATCACAAGTGGCACAAAGTGATGATGTGATAGGTAGTGGCAATGGAAAATGTAGTTTATTGGATTTTAGAAGCATGGGAAATTTTGAATTGAGGTTTGAAGAACGGATACAAAATTCAAATACGCCGTATATGAATTCCTCAATGAGTTCTACACCAAATTTTATAAATAATAATCAAAGTATTGCAACTCCATTGCTTGCACACAACCTCAGTTCTGTTACAGATGATGTCTTGTTATTAAATGACAGCAAGTTGCCAAATGGGTTTGATGTTACTGGTTATGGAATTGATGATTTGGAAGCAAATGTTATGATAAAACCAGTAAGTCTTTTTCATATTAATGTTCATTTCATTAGACTTACCTCTCTCTATATTCTGACAGTTGCAGTAAAAGTTTGAATGATCCATCTGGTTTTTGATAGATCTTAGTACTCATACAATGTCTAAGTTTAATAAATTAAACATGGATCCAGTAGAACATTTCAATCAGCATGAATGCTGAGTTAAAATGTTTCTCAAAATTTTCACCAATCTGTTTCATCATCAGGGATTTTTGTATCCATGACGTTTTATGATATCTTCATGTGGTCATATGGGCCAAAATCAGAATGGAATCTTGTTTTTCTAGTATCACATAGAAATATCTGCATTATTTCATTTTTTTTATATACCAAATTGCCTAAGTATTTAGAACACTTTATTTTATTTCATGTACCAGGTACAACAAAAATAAAATAAATTTTAGGGACATCCTTATTTTCAAACATATTCCAGTTCTGCCACTCCCAAAAAGATGTTTCAGGAAACACCCATATAATAATTTTCAATGAAAATTGCTGTTCTTAATGCAAATGTCTGTAGTTTTTTTCATAAATATTTATTCAGAATACTGCAAATATTTGCCTTTTCTAGTACAAATATTTGTTTGTACATATTTGCCTTTTTGTTAAAATATTTGCATCTAAAACTACGAATTTTGTAGAAAAAATGGCATTTTTTTCTGAAAATAATACTTAGGGGCGTGAAACCAAGTGTATTTTAAAACTTATATAAGGGTGTATAACAAACCTTCCTAAAAATAAATCTTTTTCTTATATCTTGACGGCTACACATATTTCTTAGATACTGTAAATGCAGTTTTGGTTTGTCGTGAAGATAATTTAGCTTATCATGTATACATAAATTGCATGAATTTAGTGCAATTTCTTGTCTTTTACTTAATTTGTTATGTTTATATATATACATCAGGAGATTGAAGATTTTTCCTTACTGGATGGTGATGTAGGAGGCAGTGATCTGTTTTCTCTTGGTGTCTTATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020265716.1	3.0e-140	two-component response regulator ORR22-like
Swissprot	A2X1N2.1	9.0e-97	Two-component response regulator ORR24
trEMBL	A0A5P1EWG4	2.2e-140	Two-component response regulator

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G25180.1	62.26	3e-97	352	ARR12;RR12	response regulator 12

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G09615	AT2G25180.1	310	88	6	14	313	11	301	62.26	3e-97	352
AfisC2G09615	AT4G31920.1	282	84	3	14	290	11	270	60.64	4e-90	328
AfisC2G09615	AT3G16857.1	342	132	8	9	316	21	361	51.17	8e-88	321

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00072.21	Response_reg	Domain	22	130	80.5	8.8e-23
PF00249.28	Myb_DNA-binding	Domain	201	251	29.1	7.2e-07

Gene Ontology

Accession	Ontology	Name
GO:0000156	F	phosphorelay response regulator activity
GO:0000160	P	phosphorelay signal transduction system
GO:0005515	F	protein binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0010082	P	regulation of root meristem growth
GO:0010380	P	regulation of chlorophyll biosynthetic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0031537	P	regulation of anthocyanin metabolic process
GO:0043565	F	sequence-specific DNA binding
GO:0048367	P	shoot system development
GO:0048576	P	positive regulation of short-day photoperiodism, flowering
GO:0080022	P	primary root development
GO:0080036	P	regulation of cytokinin-activated signaling pathway
GO:0080113	P	regulation of seed growth

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14491	ARR-B; two-component response regulator ARR-B family	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network