result

Gene information

Detail information of AfisC2G09630

Location

Gene	Chr	Start	End	Strand
AfisC2G09630	chr2	1611596697	1611598506	-

Sequences

CDS

Protein

Gene

>AfisC2G09630
ATGGCAAGCATTAATAAACACCAACTTTATGTCCGCGTAACAAAAGAAAGTAAATACTATTTAACATGTAGGTTATTAAATGAATATTAAGATATCACATTGAAGTGCTTAATATAATGATAGTATTTATGGACTTAGTACAACGCACCAATTGTAATATTACATTTAAAAAGTAAAATTTCGTATTCTATACTCTGGGACTTTTGTTCACCGGTATCATGTCATTCATACTTGTTCACCTGCGTCCTACTGTTTAAATATCAACAGGAGATTTCCTTTTATTCTTCCCAATCGTCTAATATTGCATCTATGGTTGGGTCACTATTGACGGCTCAGCAATAATATTTTGTATGTATAATATATCCTCTACAGAATTGAACTCAAGTAAAATCTTTATATTTTATTTTTATTTTTTGGTTTGCTCCAGATGAGAAGGAACCTAAAAAAATCTGTGAACCCGAAGATGGGAATCTTCAGACATTCACGTTGGCTGAACTGGAGAATGCATTTAGTGTTGGCGCTATAGTGGCAGACCAATTTGGCACAGTTTATAAAGGAATACTGAAGATCAAGAAGGAATGTGAATCTACTGTATTTACCGGATTTGAAATCTAATATGGAATTCTGAGGATAATCGTGTTATACAATAGACCGTGGTAGTAAGGAAGCTTAAACCGAGCAAGTGTCAAAGCGACGAAGAATTTGAGAGTTTGATAAGGAGGTTGAGCAAGGTAGATCACCGTAAGATTGTAAAACCGATTGGCTACTGCATAGAGGATGGGCAAAAGGTTATAATATACAAGCATATGCCGCATCAAGCTCTAGAAACCCGTCTATTTGATGGTATTTGCTGCACTTTTTTATCATTAATAAATACGCATTTGTTGGATGAATTCCTAAATATTTGTTTATTATTCAGTGGATCAGTGGAATATGGAGCGACTTAAGTGGGACAACAGAATGGAAATTGCTTTATCGATCACCAAAGGATTAAAGCATTTACATGCAGACCAGATTCCACCGCTTGTCCTTGGTAATCTGAAGTGCTCGAACGTTCAACTCGGTGACGGATTTAAGACCAAGATAGCAGAACTTGGATTGGCGCTGATAAGTGACGTAAATGATGAAAACGACGCGCTTAATGGTGAATTGACAGTACAATCGGATATATACAGATTTGGGTTATTATTCTTTAAAATGATCACCGGTGCAAGGGTAAGGGTGATGGCAGATGTGGCCAGGATAAACACTCTTGAGGAGTGGGTAAGTCCAATATTCATGCTCATGCACCAATAGCAATGTTCATTCTTCAGTATGCTTGCTTTCCACTGTTGACATAAAAAGCTTGTTTACCCTACTATACAGATTTCAGGATTTATATTAGCGGATAGAAGGGCTGATAAATATTCGCACAGTGTGTGTGGGCGTGTGTGTATAAATCCAATAAATATAAGTTTACTCACCGTATATTGAATTCCTAGCCTGCATGTTGATTTGACGACTTGAAATATCATTATAAGTTCTCATATAATATTCTGCAGTATATTATAAGTTACTGAACCATGTATATGATACTAGCCACGTTTATATGTTAATTGCTCATATAATTATGTTATTGCAGGCATTCAGCTGCAGAACAGCCAAAGACAACCAAAATCTGAGGGCTATTGTGAATCCGCTTTTGTTTCTTCCTTCGGAAGATCAATTTCATAGAGCTGCACACTTAGCTGCAATGTGCATGACTAAGGCTAATGCAAGACCTTCTATTCTCAAAGTTATTGAGGTACTCAGTGAAATGACTGTTGAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	KAE8821456.1	1.1e-33	Serine/threonine-protein kinase PBS1
Swissprot	Q9LS95.2	1.4e-28	Proline-rich extensin-like receptor kinase 6
trEMBL	A0A8I6XL37	8.2e-34	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G02800.1	31.25	1e-35	147	CDL1	Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC2G09630	AT5G02800.1	304	176	9	39	318	59	353	31.25	1e-35	147
AfisC2G09630	AT2G28590.1	302	171	9	39	315	84	375	31.79	5e-35	145
AfisC2G09630	AT5G18610.2	319	181	10	28	318	53	363	31.97	5e-35	144

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	58	205	67.2	1.2e-18

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0006468	P	protein phosphorylation
GO:0007275	P	multicellular organism development
GO:0044464	C	cell part

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network