Detail information of AfisC3G00023


Location
GeneChrStartEndStrand
AfisC3G00023chr341433094163581+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020256440.14.1e-80myb-related protein Zm38-like
SwissprotQ9LDR8.14.8e-73Myb-related protein M4
trEMBLA0A5P1FDG03.0e-80Transcription factor MYB41-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G21440.188.495e-75 278ATM4;ATMYB102;MYB102;MYB102MYB-like 102

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
--

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain156155.93.2e-15
PF00249.28Myb_DNA-bindingDomain6711153.02.6e-14

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0000981FRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001135Ftranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0016049Pcell growth
GO:0005634Cnucleus
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0009611Presponse to wounding
GO:0009651Presponse to salt stress
GO:0009723Presponse to ethylene
GO:0009733Presponse to auxin
GO:0009737Presponse to abscisic acid
GO:0009739Presponse to gibberellin
GO:0009751Presponse to salicylic acid
GO:0009753Presponse to jasmonic acid
GO:0009800Pcinnamic acid biosynthetic process
GO:0009909Pregulation of flower development
GO:0010091Ptrichome branching
GO:0010200Presponse to chitin
GO:0010224Presponse to UV-B
GO:0044212Ftranscription regulatory region DNA binding
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0046686Presponse to cadmium ion
GO:0042335Pcuticle development
GO:0043565Fsequence-specific DNA binding
GO:0080091Pregulation of raffinose metabolic process
GO:1900384Pregulation of flavonol biosynthetic process
GO:1903086Pnegative regulation of sinapate ester biosynthetic process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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