Detail information of AfisC3G00045


Location
GeneChrStartEndStrand
AfisC3G00045chr399714969981817-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020257804.11.5e-188B3 domain-containing protein Os07g0563300-like
SwissprotQ0D5G4.22.7e-137B3 domain-containing protein Os07g0563300
trEMBLA0A5P1FHB51.1e-188TF-B3 domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G32010.141.049e-106 381HSI2-L1;HSL1;VAL2HSI2-like 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag424107.t1
Allium fistulosumAfisC3G00045
Allium sativumAsa0G04710.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family36146156.81.5e-15

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0001076Ftranscription factor activity, RNA polymerase II transcription factor binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0009657Pplastid organization
GO:0009733Presponse to auxin
GO:0009737Presponse to abscisic acid
GO:0010262Psomatic embryogenesis
GO:0010344Pseed oilbody biogenesis
GO:0010431Pseed maturation
GO:0010601Ppositive regulation of auxin biosynthetic process
GO:0044212Ftranscription regulatory region DNA binding
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0031930Pmitochondria-nucleus signaling pathway
GO:0048573Pphotoperiodism, flowering
GO:0048580Pregulation of post-embryonic development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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