result

Gene information

Detail information of AfisC3G00081

Location

Gene	Chr	Start	End	Strand
AfisC3G00081	chr3	14802725	14805286	+

Sequences

CDS

Protein

Gene

>AfisC3G00081
ATGCTGATTCCTACCATGATGGAGATGAAGGTATTAAGACTGAATGCAATGGACAGCAATCCAAGGTAATGTGCACAAAATAATTATTTTTTGTTTACTTAACAAATATACAAGTATAACATATTTAAAATTTTCTTCTTCATATCTTCAGTTTAACCTATACAATAAACTATTTCAACATGTAAAGCCAGACATTATATAACGCCATTGATATAAATTTGACATTACATAAAGAGTAAATTTTAGAGATGTTGGACATGGATATCCATTACTTGATCCATTTTTGAAATTTAGGTTCGGTTGTTAATATACTTTTGGTATTTCTTTGTATATTCGTTTGTCCTACTGTGTAGATGTCAAGTAAATCTAGAAATGAGAATTCCATGTCTTGTTTGTATGTGTCCCCTGATCTAACTTGATTATCAATTTATTCAGTCTGTGTGTGTATCTAGAGTCATAGAGGACTTCAGGTTGTGTTGTTGTCTACAGTTTTCATTTCTATCTTTGCACATGCTTATCATATTAAAAAATAATGATGGTAAGATGACCAAAAGGAAACTGATCGTAGCAGACTGGCTAACATAAATTTTGACTGAATGCAGGTCCTACATAGCAGAGGTGCTATTGGCCTTGGAGTACCTGCACATGCTAGGCATCATCTACCGTGACCTAAAACCAGAAAACATCCTTGTCCGTGAAGATGGACACATCATGCTTTCAGACTTCGATCTTTCCCTACGTTGCTCCTTCAGTCCAACCTTAATAAACTCATCCTCCCTCCCTCGCCAAACCTCTACGTTCTGCATCGAACCTCCTTCGTGTATCCAACCCTCCTGCACAGTCCCCACGTCCTGCTTCTCTCCTCGGTTTTTCTCTCCTTCAAAATCAAAAAAGAAGAAGCAAAACAAAGCCACCAAGCAAGCCACAGAAACAACCAACCAAGTCAACCCTCTCCCAGAGCTAGTAGCAGAACCGACCGATGCACGCTCCATGTCATTCGTGGGCACCCACGAGTACTTGGCGCCCGAAATCATAAGAGGCGAAGGCCACGGCAGCGCAGTCGACTGGTGGACATTAGGTATTATTTGGTTTGCAATTTTGAGTTTCATAACAATGTAAATGCATTTGATTAAGTACTTTCGAATTTTTTTTCGAAAAAAGGTGAATTTAGAAATCGGTTTTGAACCTACAATATTTTTGATAACATTTTGCATTTTCATAATAAGATAGATAAATTGGCTAGATAATGTTAAAGAAATTTCATAATAGGAAAAAAAGCAGCAAAGCTTTCATCTTCACTAAATATTTCAACATTTGGAGAAACAAGTTGCATTGTTCATAAGAAAGATGGAGGTGATAATACTTGCACATACATGATATTACTACCAGCTAAAAGATTATGTACTAGCTAAGTTGTTGTATTTCGTATTTTATCCAACGGGCTTTCGTTAAAAGAGGACCGATGCAATAAATATTAATGTTTTCCTTGTGCCTGTTAAATTATAATTGCAGTCCTCTCTTATGGAAGCGTTTTTTTTCAGTCATGTAAATATGTCAGTTTGTGATGGTGGTGCACATTTAGTTTAATTTTATATATTGATTTTTGGCTAGAAGTAGATATGTTTTTTATGATTTTTTTTCCAGTTACGCAAGTGTTACATGATGCATGTTTTGTTCTTATTCTAATAATAGCTTATTAGGTCCTTTTGCCATTTATTTTATGAATGCAGGCTTGTTTATGCGATGCTTAAAGGGAGATTGTGGATGGTGGTATTGTTGTAAAGGTAAAAATAATTTGATATTCAAGTAATTTTCAAATTAAACGTTGCATAATATAGTTTGGTAACTATTAGAATAGTTAGCTTATTAACTAATTCATCATTTTATTGCACATGTACTCGTTTGGTTTGGTAATTATTGAAATTATCATTCAATAGGGGGAAAAATATTACGAACAATAACAAAAATCAGACATAGTAAAATGGTTTAAATGAACATACTACAGGCCATCGTTTCCTTCTATTTTTCAAAAGCAATAACAAAAATCAGACATAGTACACACATGCAACATACTTCATATATGCTATATCATAGGAATTGTGGTTTCTGGTTTGAGTTAATAGTTGACAGAGCAAGCTATGAACTGCTACTCTAAACCTATGCCCCAAATTGCAAGGAGCAGAATCAATACTTACTGCAGCACATTTAACTTCTGTTTTTCAGTTTGTGTACATAATTAAAAGTCATTGTGCTAACTTTTGTTTGTGTACAGTTAATTTGAAAGTATTCCTTATTGCAGCACATTTAACTTCATTTTTTCAGTTAGGTATTTGTTTATTTTATTTAACGTGCGCATTTACTACAGCACATACGCAAAAACAACACATACAGTCAAAAACAACATTGAGAAAATGCCTGAATTAATTGCCTTTAGAATACATCTTGGGACGTGCATCTGCCTCTAGAATACACATTGTGCTAACAACTTGTCTTAATGATTTCTTGTCTTACTTGTTTGCAGGTGAACGAACTTCGCATAATACAGGATTGCAAACTCTCTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020247632.1	9.6e-52	serine/threonine-protein kinase D6PK-like
Swissprot	P15792.1	2.8e-48	Protein kinase PVPK-1
trEMBL	A0A5P1FV03	6.9e-52	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G47750.1	73.94	8e-68	253	D6PKL2;PK5	D6 protein kinase like 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G00081	AT5G47750.1	165	30	4	24	181	296	454	73.94	8e-68	253
AfisC3G00081	AT4G26610.1	162	41	3	24	181	228	383	68.52	1e-59	225
AfisC3G00081	AT3G27580.2	168	41	5	22	181	285	443	65.48	2e-59	224

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	20	71	57.3	1.4e-15
PF00069.22	Pkinase	Domain	151	181	31.2	1.3e-07

Gene Ontology

Accession	Ontology	Name
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005730	C	nucleolus
GO:0006468	P	protein phosphorylation
GO:0008728	F	GTP diphosphokinase activity
GO:0009507	C	chloroplast
GO:0009734	P	auxin-activated signaling pathway
GO:0009860	P	pollen tube growth
GO:0009908	P	flower development
GO:0009925	C	basal plasma membrane
GO:0009958	P	positive gravitropism
GO:0009986	C	cell surface
GO:0010150	P	leaf senescence
GO:0010540	P	basipetal auxin transport
GO:0015970	P	guanosine tetraphosphate biosynthetic process
GO:0015979	P	photosynthesis
GO:0019901	F	protein kinase binding
GO:0048766	P	root hair initiation
GO:0048767	P	root hair elongation
GO:0048825	P	cotyledon development
GO:0080167	P	response to karrikin
GO:1901981	F	phosphatidylinositol phosphate binding
GO:2000114	P	regulation of establishment of cell polarity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network