Detail information of AfisC3G00144


Location
GeneChrStartEndStrand
AfisC3G00144chr32589794725898702+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008776122.11.1e-18transcription factor bHLH53
SwissprotQ9SND4.11.3e-05bHLH transcription factor bHLH037
trEMBLA0A8B7BGT57.8e-19transcription factor bHLH53

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G22100.142.999e-2093.2basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag464254.t1; g464267.t1
Allium fistulosumAfisC3G00144
Allium sativumAsa8G05401.1
Arabidopsis thalianaAT3G22100.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00010.23HLHDomain489630.32.7e-07

Gene Ontology
AccessionOntologyName
GO:0005488Fbinding
GO:0006355Pregulation of transcription, DNA-templated
GO:0010500Ptransmitting tissue development
GO:0048462Pcarpel formation
GO:0080126Povary septum development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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