Detail information of AfisC3G00312


Location
GeneChrStartEndStrand
AfisC3G00312chr35321039253214189+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020091963.18.3e-41squamosa promoter-binding-like protein 3
SwissprotQ38740.19.9e-31Squamosa promoter-binding protein 2
trEMBLA0A6P5FEW26.0e-41squamosa promoter-binding-like protein 3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G60030.160.753e-34 140SPL12squamosa promoter-binding protein-like 12

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag537944.t1
Allium fistulosumAfisC3G00312
Allium sativumAsa2G00463.1
Arabidopsis thalianaAT1G53160.1; AT1G53160.2; AT2G33810.1; AT3G15270.1
Oryza sativaLOC_Os07g32170.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03110.11SBPDomain39112111.51.5e-32

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0046872Fmetal ion binding
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0006355Pregulation of transcription, DNA-templated
GO:0009908Pflower development
GO:0010321Pregulation of vegetative phase change

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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