result

Gene information

Detail information of AfisC3G00459

Location

Gene	Chr	Start	End	Strand
AfisC3G00459	chr3	76991322	76993805	+

Sequences

CDS

>AfisC3G00459
ATGAGAATCATGTCATCTCCAATCTTCCTCCCCGTAATGTTCCTACTCTATCTGAATACATATTTGTCAAACTCATCGCCTTCCAACGCCATAAACACCATTTCAAAGGGCGAGTTTCTCTCTGGGAACCAAACCATAAGCTCCAAAAATGGAAGATTCGAACTCGGTTTCTTCACGCGTGGAAGCTCCGGCAACTACTACATAGGCATATGGTACAAATCACTTCCAAATCAAACCGTGGTATGGGTTGCAAACAGAGAAGTTCCAGTCAAAGAGCCGTCCTCTTCAAAGCTCCTCTTATCCGAAAAAGGCAACCTCGTTCTCTCAACTACTTCAAACAACACTACAATTCCAGTCTGGTCGACCAAATCAACCACCTCGTCCAGAACAGCAGCAGCTGTACTACTCAACACCGGTAACCTAATACTGTTAGTTAACGGGTCGGATCTGAACTCAGCCCATGTTTGGCAGAGTTTTGAAGACCCGACAGACACTTCTCTCCCTGGAAGCTGGATCGGGATGAACAAAATAACTGGACAGTATCAGAGACTGACTTCATGGAAGAACTCAGAAGACCCATCCCCAGGTTTGTTCTCAGAAGGCATGAAACTGGACGGTTCAAATCAGTATGTTATATACCGTAACTTGACCAGAATATACTGGACTAGCGGGCTCTGGAACGGGGCCTACTTTGATTACTTGCCTAGTACTGATCAACAAAGCATCTTCAACTTCAGCTTCGTAGATGAGAAAGACAGGAAGTACGCTACATACACTGTAGCCAGTGATGACATAATAACTCGAGGTGTGATGGGTACGAATGGGCAGCTGGTTCAGTACATTTGGCTCGAAAGCAGTCAGCAATGGCAGTCTGTATCTGCTAGCCCACTTCGAAACTGTGATGTGTACGATCTTTGTGGACCTTTCGGGGTTTGTGAAGAGATGAATACCAGTGTTTGTCGGTGTCTGTTCGGGTATCAACCCGCAAATGAGCGAGATTGGAAGCTCAACGATAGGAGCAAAGGTTGTGTCAGGAGATTTCAATTAGAGTGTGGTAATGACTGGTTTTTTAAAATGGACAATATGAGACTGCCTGATGATCCAGATAAGAAATCGATGGCTGCGAGTAGTAGTTCAGACTGTGAAGATTCATGTAAAAATGACTGTTCTTGCAATGCTTACTCCTACGAAGGTAACAATGGATGTTCGATTTGGAAAGGAGACCTTAAGAACATTCATCAACTATACGTTGGCAATAGAGGAGGTGCAGAACTTTTTCTCCGTCTTTCAAAGCATGATATGCCTCCTAGTTCGAATGATAGTTCAAGAAGTAGTTCGCATGGTAGTCGTAATCTCATTGGAATGATTCTCGGTTTAGTACTATCGAGCGTCGTTTTAATCACAGTTGTAGCGATTGGGTTAGCTAGTGCTTATAGGAGGAGGAGGCGTGCATGCATTCTCAAAAAAGTAGATGGATCACTCATCCGATTCCATTATGGAGAGCTCCGGCGTATGACAAAAAATTTCAGTGAGAAACTAGGAAGTGGAGGGTTTGGAACAGTGTACAAAGGTGACATGCCAGATTCGACCAAAATTGCGGTAAAATCACTACAAGGGTTGAGCCAAGGTGAGAAGCAATTTCGAGCAGAAGTGAGCACATTAGGCGCTATTCAACACGTGAACTTAGTGCAACTTCTTGGATTTTGCTTCGAAGGCGGCAAAAACAATAGAAGGTTGTTAGTGTATGAGTTGATGCCAAAAGGGTCTTTAGACGCCCATCTCTTCCAACACCGAAACAAAGGCTTTCCGGTACTGGATTGGAGTACTAGGTACCAAATTGCTTTAGGCACTGCAAAAGGATTGGCCTATTTGCATGAGCAGTGTAGAGAGCGTATTGTACACTGTGACATCAAGCCGGATAATATACTTTTGGATGAGTTGTATGTGCCAAAGGTGGCGGATTTTGGTTTGGCAAAGCTGTATGATAGGGAATTTAGCAAAGTTTTAACGACTATGAGAGGAACGATAGGTTATCTTGCACCTGAATGGATATCGGGATTGGAAATAACGCCTAAAGTTGATGTTTATAGCTATGGGATGATGTTGTTTGAGATGATATCAGGCAAAAGAAACAGGCAAAATGACGGGGAAGATAAAGGGTACTACTATCCTGCGTGGGCTGCTAGAAAGATAAGGAATGGAGATGTGATGACTATATTAGATGAAAGATTGAGAGGAGAGGCGAGTATAGAGGAAGTGAGTAGATTGGGGAAGGTTGCGATTTGGTGTGTTCAAGATATGGAGGAGCGTAGGCCAACCATGGGACAAATTGTTCAAGTTCTCGACGGAGTTTTGGAGGTCAACATGCCTCCTATTTCTCACGTTTTGGAGATTCATGATGAAGCCGAAGAGGACACAGTTCACTACTCTAACTTTGAGCCAGATGAAACAAATATAATGACGATTGATGTGGTTAATCCGTAA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256466.1	2.9e-254	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
Swissprot	O64477.1	3.8e-195	G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
trEMBL	A0A835R8V2	8.2e-235	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G19130.1	48.46	0.0	734		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G00459	AT2G19130.1	813	387	15	9	810	4	795	48.46	0.0	734
AfisC3G00459	AT4G00340.1	773	387	23	39	783	26	761	41.53	2e-145	513
AfisC3G00459	AT4G21380.1	794	467	18	28	781	26	800	33.75	1e-120	431

Ortholog group

Species	Genes
Allium cepa	g411992.t1
Allium fistulosum	AfisC3G00459
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	78	189	92.8	1.1e-26
PF00954.17	S_locus_glycop	Domain	221	329	93.3	1.2e-26
PF08276.8	PAN_2	Domain	351	411	54.3	9.6e-15
PF00069.22	Pkinase	Domain	510	779	159.0	1.3e-46

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006468	P	protein phosphorylation
GO:0051707	P	response to other organism
GO:0009875	P	pollen-pistil interaction
GO:0044699	P	single-organism process
GO:0045087	P	innate immune response
GO:0050789	P	regulation of biological process
GO:0071215	P	cellular response to abscisic acid stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network