result

Gene information

Detail information of AfisC3G00530

Location

Gene	Chr	Start	End	Strand
AfisC3G00530	chr3	94134134	94136210	-

Sequences

CDS

Protein

Gene

>AfisC3G00530
ATGTCAGAGACTGCATCAGAGAAGACTTCATCAGAGAACGAAAAATCAGAGGCTAAAGAAAACCTTAACGCACACCTGATCTCTAAACATCCTCCTCAATGTTCAGAAGCAGCAACAAAGAAAAACGCTGTAAATAACAATGGAAAGAATCAGCCACCAGCAATACCAAGCTCAAAGCTGAGCGATGCAAAAACAAGCAATTCCAAAAACTCTACAGGCCAAGGAAGAAACAACGGCAGAAGCGACAGCATAGATAGCAATTCAACAGGGACTATAAAGAGGCATACGGGAGGTGACTGTAGATGGGAGGCGGTTCAGTTGGCAAATGCCAGAGATGCCCCTCTAGGGCTGAGTCATTTCAGGCTGCTGAAGAGGTTGGGGTATGGGGATATTGGAAGTGTGTATTTGGTGGAGCTTAGGGGCACTGGGGCGTACTATGCAATGAAGGTGATGGATAGAGCGTCCCTTGTGAGTAGGAATAAGCTGCTTAGGGCGTAGACCGAGAGGGAGATTCTGGGCTTGCTGGATCATCCCTTTTTGCCGACTTTGTATTGCTACTTTGAGACGGAGAAGTTCTACTGCCTTGTGATGGAGTATTGTAGTGGGGGGAATCTGCATTCGCTTAGGCAGAAGCAGCCTAGCAAGTATTTCACTGAACAAGCAGCCAGGTAATTGTGCCATGACAAAAATTAATCTTTTAATAGGAAAAATCTTTGAGTCTCTGTGTACATGTGATTAAACAAATGAGCTATATGAATCTGTACCGTTGGTACAGCTTTTTAACTGTACGTCTGGAGCAAATTATGAACACCTAAACAAATTATATATTGATTATCATACATGATTAAAAGTACTGTAAAAATAAAAGAAGAAAATTGTACAAGGGACATGATTAGCCAGGGAAAGAACCTAAAAATAACTATTAATAAGGAAATAAGAAAATGTAAGTTCAATTATATTATATGCACTTATTAATTTTATATATTGATCAAAATAGTCTTGAACTGTTCTCTTTATACTAAAGAACAAACAAAAACAATTCTAAAAATCAGATTAAATCTAAAGAAAAACTGAAAATTTGAAGTTTTAAAAATAAAATGTTTCACAAATATTTATTTTGAATAGTTCAAAAAATTCCTAAACTTTCACCTTCTAATACTTTGGATTTCTTTGATTTATATGAAATAAATAAAAGGACTTCAGATTATAGATTTTTTTTAAAAAAAAAAGTAAAAGACGAATTTAACTTATTTTATTTTGATTTTCCTTTAGCAATTTAAGTTTTCCCCTACAGCATTATTTTAATGATGTCTCTTTTCTAATTTTTGTACCCTTTATCAATCATCCACATAAATTGTTAAAAAATCCCAATTCTATACTAGGGCAATTAGAAATTTGTACATCATCGGTATAAATACATATTCCTTTTTCTGTATATAAATATCTACTAGCGTGGTATTGAATTTTTACAAATTATGGATTTTTTCTTTGAACAAATTACATATTGTTCGTCATCATCAATATCTTATTCTCAACTGACAGCCGGATGAATTATCATTTTCCATCGTTTAAATCAACAGTTCAGCTGAATTTTAACCGTACAGCTGATACATATTATTTATAATAAATAAATTCTTAAAGAAGTCCATGATTTATACCAGCAGTAAAGATTCAAACTCCTTTTCTGGAAACCTTTTTTTTTATAAATTAAATGAAACAAATTATGAAAGACAAGAAAATGATGTATAAATCTCACCTTGACTGTTGAATATTGACCAGATTCTATGCTTCGGAGGTTCTCCTAGCACTAGAATACCTCCACATGTTAGGCGTAGTATACCACGACCTGAAACCCGAAAACGTCCTTGTAAGAGAAGAAGGCCACATAATGCTGTCTGATTTCGACCTCTCGCTGCGCTGCTCCGTCAGCCCAACCCTAGTAAAGTCGCAATCAACCAACTCACTCATCCTCGAAGGCGATCAAGCCGTCCAAAGCTGCATCCAACCATCCTCCTTCCCCCGCATCCTCCCCAAACGCAGCCGAAAGTCCAAATCCGACTACGGAGTAGGAAGTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020246619.1	3.3e-96	serine/threonine-protein kinase RHS3-like
Swissprot	Q1PFB9.1	5.5e-72	AGC serine/threonine-protein kinase subfamily 1 member 7
trEMBL	A0A5P1FTM1	2.4e-96	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G79250.1	55.03	6e-79	290	AGC1.7	AGC kinase 1.7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G00530	AT1G79250.2	298	80	5	44	287	62	359	55.03	6e-79	290
AfisC3G00530	AT1G79250.1	298	80	5	44	287	62	359	55.03	6e-79	290
AfisC3G00530	AT3G12690.3	273	81	5	56	288	118	390	55.68	3e-77	285

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	157	243	79.4	2.4e-22

Gene Ontology

Accession	Ontology	Name
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005730	C	nucleolus
GO:0006468	P	protein phosphorylation
GO:0008728	F	GTP diphosphokinase activity
GO:0008893	F	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity
GO:0009507	C	chloroplast
GO:0009734	P	auxin-activated signaling pathway
GO:0009860	P	pollen tube growth
GO:0009882	F	blue light photoreceptor activity
GO:0009908	P	flower development
GO:0009925	C	basal plasma membrane
GO:0009958	P	positive gravitropism
GO:0009986	C	cell surface
GO:0010150	P	leaf senescence
GO:0010540	P	basipetal auxin transport
GO:0015970	P	guanosine tetraphosphate biosynthetic process
GO:0015979	P	photosynthesis
GO:0019901	F	protein kinase binding
GO:0032550	F	purine ribonucleoside binding
GO:0032555	F	purine ribonucleotide binding
GO:0035639	F	purine ribonucleoside triphosphate binding
GO:0042594	P	response to starvation
GO:0048766	P	root hair initiation
GO:0048767	P	root hair elongation
GO:0048825	P	cotyledon development
GO:0080167	P	response to karrikin
GO:1901981	F	phosphatidylinositol phosphate binding
GO:2000114	P	regulation of establishment of cell polarity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network