Detail information of AfisC3G00533


Location
GeneChrStartEndStrand
AfisC3G00533chr39470934294712575-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrKAF6168931.13.9e-49hypothetical protein GIB67_038428
SwissprotQ9S7Y1.16.5e-41bHLH transcription factor bHLH030
trEMBLA0A7M3UQK02.2e-54BHLH transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G68810.161.081e-53 206basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag520310.t1
Allium fistulosumAfisC3G00533
Allium sativumAsa0G04997.1; Asa2G00222.1; Asa2G02670.1; Asa2G07441.1; Asa4G00732.1; Asa4G03771.1; Asa6G02970.1; Asa6G03602.1; Asa6G07058.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00010.23HLHDomain10314942.34.7e-11

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009718Panthocyanin-containing compound biosynthetic process
GO:0009941Cchloroplast envelope
GO:0010200Presponse to chitin
GO:0016036Pcellular response to phosphate starvation
GO:0042538Phyperosmotic salinity response
GO:0080147Proot hair cell development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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