Detail information of AfisC3G00740


Location
GeneChrStartEndStrand
AfisC3G00740chr3131755080131761420-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_008797762.13.4e-103PHD finger protein ALFIN-LIKE 3-like isoform X3
SwissprotB8BJV8.15.3e-93PHD finger protein ALFIN-LIKE 8
trEMBLA0A8B7CER32.4e-103PHD finger protein ALFIN-LIKE 3-like isoform X3

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G20510.165.442e-91 332AL5alfin-like 5

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12165.5DUF3594Family12139217.04.3e-65
PF00628.26PHDDomain21426241.39.4e-11

Gene Ontology
AccessionOntologyName
GO:0003714Ftranscription corepressor activity
GO:0016020Cmembrane
GO:0005829Ccytosol
GO:0046872Fmetal ion binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0009414Presponse to water deprivation
GO:0044212Ftranscription regulatory region DNA binding
GO:0016036Pcellular response to phosphate starvation
GO:0045727Ppositive regulation of translation
GO:0035064Fmethylated histone binding
GO:0043565Fsequence-specific DNA binding
GO:0048767Proot hair elongation
GO:0055065Pmetal ion homeostasis
GO:0071472Pcellular response to salt stress

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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