result

Gene information

Detail information of AfisC3G00809

Location

Gene	Chr	Start	End	Strand
AfisC3G00809	chr3	147795630	147797382	+

Sequences

CDS

Protein

Gene

>AfisC3G00809
ATGAATGATGAAATAAAAAGCAGAAAGGGGCAAGGGAAAAAAGTGGTGTGTGTACCGGCACCGGCAGCAGCAAGCAGTAGATCAAGTGGAGAAGTGGTACCATCTGATCTTTGGGCTTGGAGGAAGTATGGCCAAAAACCTATTAAGGGTTCTCCTTATCCCAGGTAATCATTTCTATGTCATAATATTCTTCTCACCTTTTTCGCTTACCGTATTATCTTTAGAGTACAACTAGCATTAACCTGAAAAGAATATAAGTCTGATTGCATGCATAACAATCATCTTACAGTTATCATTGCTATACATTATACAAGTGAAAATTGTGATTCTTTTTCTCCACCATCCAAATTGAATTAATACAACAAAAAAGTGGTTATACCTTATGTTACATAACAAAGGTTAATATTCCTCTATGATGTAGTAATAAACCAGTGAAGTAATAGAGCAACAATCTCCTACGCCAAATAAATTATGTTTCCATGTCCAATGCAATCAAAACTTTCAATCAATTAAGAAAAACAATTAATCTTTTGCTATTCATAACAAATACTTATTTCATATGATTCAATGGTGTCTTTTGAAAGAAAGTACTATCTTCTTAAAGCTTCCACTACTCAATATATTTTTTTATGTCAATTAAAACAACTACACAAAAATTTGCACATCAGCCATTATTATTTGAGTTTCGCTATAATGTTCTATTTATTTATTGATTTACGTAATAACATTATGATAATAATTTTTTTATGTGCAAAATTACTTATTACCATTCTTTTAATCAAGTCCATATCTTTTGATAAAAATTAGTTACGTTATTATTTAACTTATAAAAATATATGTATGTATATGTATATGTATGTATGTTTGTATGTTGTCAATGCCCTTTTTAATGTTTATTTTATACTTGGATATAAATTTAGCGAGTCTAATTAAAATTAAATAAGAAAGCGACGTATATAGGCGCATATAGTAGTAGTACAAATATTTAATATGGATGGATTGGATTAAAAAGGCACAGTAGAGAACCAATCTTTGGGACAAAAGAATCCATTTGTCAAGGACCATAACTATCTCATGATGGGAAGCTTAGATTATATATTTAACTTGATAATTACACGATTAGGAAAATCGAGGAGTTGAACAAACACATTTAGTTACACTTACACAACTAATTCTTTTACCATTGTTATCCTGATCACTGGTATAAAATTTGATAACTTTTATTTTACAACTATATGAACATGGCATGTGGTGTACAAAACATTTACATGCTACTCAACTCAATATGCCAACAAACTGTAAAATTACAAACTGCATGTGAAATCACATCACATGTTTTGATTAAAATCAATTACGTTCTTCTAGAGATCTAAATAATTAAATATAATATTTGATCTAAAGGTCAAAATCAACACAGATAAATCCATGGTGATTTGAACTGACTATGTGCTTACTAGAGTAAAAACTGAAATATTGTATGCATTTCAAACAACAAACCTCATGAATAAAAAAATGGTGCAGGGGATATTACAGATGCAGCAGCTCAAAAGGATGCTCAGCAAGAAAACAAGTAGAAAGAAGCAGAACCGACCCAAACATGCTAGTCATCACCTACACATCCGACCACAACCACCCTTGGCCTACTCAACGTAATGCACTTGCTGGCTCCACCCGATTCCAACCTTCCAAATCCAAAATCAACACCTCCGCCTCTTCCTCTTGTTATGAAGTAGTTGACATTGTTATGAAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	TYG97060.1	1.0e-52	hypothetical protein ES288_A10G007000v1
Swissprot	O64747.1	3.5e-50	WRKY DNA-binding protein 35
trEMBL	A0A8J5Y3Q3	5.6e-53	WRKY domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G34830.1	92.93	8e-53	201	AtWRKY35;MEE24;WRKY35	WRKY DNA-binding protein 35

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G00809	AT2G34830.1	99	7	0	5	103	185	283	92.93	8e-53	201
AfisC3G00809	AT1G30650.1	99	10	0	5	103	187	285	89.90	6e-51	195
AfisC3G00809	AT4G01250.1	116	35	1	6	121	109	214	61.21	2e-36	147

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	36	93	91.8	2.3e-26

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005516	F	calmodulin binding
GO:0005634	C	nucleus
GO:0007263	P	nitric oxide mediated signal transduction
GO:0009555	P	pollen development
GO:0009626	P	plant-type hypersensitive response
GO:0009739	P	response to gibberellin
GO:0009793	P	embryo development ending in seed dormancy
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0010150	P	leaf senescence
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0032550	F	purine ribonucleoside binding
GO:0032559	F	adenyl ribonucleotide binding
GO:0043168	F	anion binding
GO:0043565	F	sequence-specific DNA binding
GO:0051607	P	defense response to virus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network