result

Gene information

Detail information of AfisC3G00814

Location

Gene	Chr	Start	End	Strand
AfisC3G00814	chr3	148290779	148297487	-

Sequences

CDS

Protein

Gene

>AfisC3G00814
ATGCTTCTTAATAGTACTTCGTCAACTATTGTGACCGCTTTAGACAAAGAGGCGGAAAGACTTATCGATGTCAACGTGGACGAGTTGATCAATATCTCAAAGATGGTTAGAACTATTTAACATATAACTCTCTACACAGCTACTCATTTTTCAACAAAATTTTACTTTTTCGTTTATGATATCTATTGATATGTTATGTTGTTTGATTCAGGAAAACGGTGAACTGAAGGTGCATAACATTTTCCAAAAATCAATGGGATTAGATGTTTTTTATTTCAGGCCAAACAACTACGAAATGAATAACAAAGATACATTCCTCCGACCTCGAAGAATAAGCAAGAAAAATACGCGTTCTTAATTATCTTCTTCTATGTCTCAGGTAAAATATTCTTTGCCTGTATATAAACTAATTTGTTAGAACATTTAAATTGATAAAACACCAAACCTTTTTTTTTCGCACTTATTTCTAATTTATATAACATGCTTCAGACAATGGCTGTGACTGAGCAAAGTACAACCATTAAACATTTCAATCCAAACAAGCGATACTACTCTGACTGACTCTGATTACAAAGGAAAAAAAGTGGTAGGCTGATTTAATACTACTCTAAGTATGTTTCCAGTTGATGTGCTCACACTGCTTCTGCTTATGTAGCTGGAATTTTTTTTTTTGGCAAACAGCCTATAGACGATGTCAGCAATGGCAATACTGATTGCCGCCCACCTTTACAGTCTACAACAAAGTGAGGACGAAGTGGGATTTTTATAGCTATACGTTTGTTGTCACTGTTTATTGCTAATTTCTTTTCTCTGTTATGCAAATTAGTGGTGTAATTATATTTACGCAGCTGCATTCCTATTGCCTGTTTTAACTTTTCATTATATGACTCGATTTTCACTTACCTGCCCTTATTACACTATTGTTTTACTCTGTGCTTTCCCACACTGAACATTGACTGTAGTGCATTATAGAATGATCTAAAGCACTGCTATATTTTTTTTTCCAGGATGATGAAGAACTTGCCAATCAAGTGGAACCTACCCATACTCAGCTCGTGGACAAGCACAGAAGAAAAAAATATGAACGGATGTCATATTATAAAATTGATCAATTTCTTCGTGCATTTTAACTACAGTTTTTGCAGTTCAATGATTTGGTAGTTTGTGCTGTGTTTGTTCTGCACATCAGTCATGTACTTCTTAATATTCACAAAAGAGTTTGAGAGATTGTAGATTAAACCTGAGTAATCTTTTTCTTTTCTTTGATGTCTTTTCTGAACTGCGAGATATGGTTATCCGTAGTTGAGTGATGCTCTAAGTTTGAAATTTGATCGCTAGGTGGAGTTAGTTGTGATCTTTAAAATAATGGAAAACAGTGCACGATAGTAATGGAATTAAAGATGTAGGTAAATCAAGTATAAGTTATAAACTACCTGAGAGTGAGCATCCATCATCTCTGACACATCTATGTTCTTAGTAATTTTTCTAGCAATTAGGGTTGGTATTATTCATCTCATGGTTATTTGGTTTAAATTCAAATAACGCCTCAGTCTTCGATAGATGTTGGAAAATCTTTTCAATTTTCTGGGCCCATTTTCCTACAGGATATCATATTTTGTTTTGCAACAACTGATTTAGAATATGTGTTGTAATCAGCAACAAATGATATAATTAGATTGTTCAATATAGCATACACAGTTACAGATTTGCAGCATAGAAATATACAGCTGGTACAATGCAAATCATGTATTACGCAACAAATACTTTGAGAATTGCTAACAACTGATAAGGAAGTATTACTGCATGTCATCAATGCTAACGAAAAGTGGTCAACAATAATGACACGGTTAATGGGTACTGAACAATAGTTGATGAGACTAACCATGGTAGGGATGAAAAAAAATGATCGACTGAACAAACTGCATGTATTAAAGAACGGAGTGAAAATTTTCAACATGATATTGTATCCTATTATCTCAAAGTATAAATCTCTGACGTTAACAATAAAAAGGTAAGGTACTAAGCAAGTTCAAATCATTCGGTTTGCTAGCTATCTATGCAAAATTGTTTACCATTCACATATTTACAGCCCAGTACCCATTCGCCAACAGATAATGTTTTGTGCATCTACATGTAGAGCTTTATTGATAATAATATATAATATAGTTGGTTAAAGATTTTGTGTACAGACTACAGATACACAACATATATAGGCAATTAGATTTCAAGCACCGAGCGATTCAACAATATGTATACATATGTATATGTTGTGCACTGTGCATCAATATGCATACGAACGATATGGTCACTCTTCTGTTCTAACATCGTCTTTCACGTGTTCTGATTAAACCTTACAGAGTATAACAATGCCCGTGTGCGTAGCACGGGCTACTCACTAGTTTAATATTCAATATTAGATAATTAAATTAGTAATTATATATAAGTTTCTTCTTGGTTCTGAAGAGCGAAATTTTGGCTCTATTTTTTTTCATTCTACCGCCAAAAATTCCTTTCTATTTTCGTTCTCCGGTTAAAATTCTACATTCCCTCCGCTCTAACTTAAACATTAAGAAAAAATCAAAATCCACGCGTTACCAAATTTTCATTCCTTTGCTCTAAACCTAGATCTAAATCCATACCCATAAATTTAACCACGCCTTCTTTTCTGTATCCAACAGAAAAACGATGTTGAAGGTAATCGAAGTAGGCTACATCTCAACACCAAAAGCAGTCAACGTCGTGAGTCATCTACTGCCGCCCACATCTCAATGATGATGCCGAAGCTAATGATTAGCGATGAGGTTCATAGATGACATCGAGATTAATGGTTAGCGCTTAGATCCGTAGTTGACATCGAGGTTGATAACTGGTGCCGAAGCTAATGATTAGCGCCAAGAGTAATCATTGCCGCCAACATCTCAATGTCGCGAGTATTCAACATCGTGAGCATTGAAGAGGAGCGACGTCGAGCACCATCAGTGAGCAATGTCCGATATTGTGAGTGTCGAAGGGTCCACCAGTGAGCAATGCCAATGACAAGCAGCACCGATGTCGTCAGTTTCTACTCGGATTCGTACTAGAACTCAGATCTACATCAAAAACGAAAATTCCATATCGAAGGTTTGGTCATTATGATCAATGCATTGAAAGCAATACCGAAGTGCGAATCAATGGCATAAATCATAGGGAACAATCTCGTAAATCACAGAATTCAGGTGCCAAATGAAATAGAATCTGCACTATGAATAGTTGCAAAAGTCAGAGGACTTCGAAGACAGGCAATATCAAGGCTTGAGGAGCGATATTTAGTGTTAAGGCCAAAGATCGAATTGATGCCAGAGACAATATCAAGAAACATCAGGTGATTTTGACCACTTCAGATCTCATATCTACACTAGTTGAGTTCGAGTAAAGTAGCATTTCAACATCCTTTTAGGTATGTGCTTAAACTGAATCTCAAGCATGAGCAAGATTTCTGGTTTGTACTTAGAAATAAGGATATTATATATCTTTCAGTAATTTCTAAATATTAATATTAGATATATTTTTAGGTATATTTATTTTATGATTTCGAAATATATATAAAGTGATTTTGAAATTACATAACACAGAAGAACTCAATCTAGCTTTAGGCATATCAGTCTTTGTATATTAGATGTCATGTATATGTATGGATTTCAAACTAATATATGTTTTCACAATTCAAACATATAAAAATCAGATATATACCAATTTCAAACATACGTATCAAGTTCGTATCAAAGGATTTTAAATGTCTCATTTTGAAAATTTTGGATATAACGAGGCATGGTTTCAAGTACGTGGTTTCACATTTATTAGAAGAATTTCACTTATATCTGTTTACCAATAGACCTTGCATACGTATTTGATTTTTAAGTGTATTAGTTTTGCACATATTGAGTATATAAAAGTCTTGAATAAGGCAGATTTTTAGAAATGTTAGTGTCAGGTTTTGAAATATGTAAGTTTTTGTGTATATGTATATATGTGGCTTTAAAGTCCCAAATATATTTGGTTTTAAAAAAAACTTGTATGAGTTTTGCAACAGACAGCCATAGCCTAGCCGAGAGGGTAACTTCATCTATAATAATACTTTAAATTAACTTGAAAAATGTAAATAATAATTAGTAGATCATAACTAACTAATTAACTGTGCCATAAGTTTAGGTGAGAAGAGAGAGGATAAGTGACAGGATGAAAAAATTGCAAGACCTTGTCCCAGGTTGTGATAAGGTGAGCCTTATCCTTTGTCATAGAATATTCGTATTTCCTTACATGATCGTATGGATTAGAAGGGTAATCATAAAATGCAAGGAGTATAAAAATGTAGTTTTGTTGGCTATATAGGTTATCGGAAAGGCGCTTGTTTTGGAAGAAATAATCAATTATGTGCAGTCATTGCAGAACCAAGTTGAGGTACATAAGAAAGAAACAAAATATATGCATATTTGTTTTGCAGTTATTCATTTCCACATTTTATTTTTTATCACATTTTTTTAGTGTATAATTTTACTTTTTTGCATTTTTGAAGTTTCTTTCTATGAAGCTTGCCTCCGTAAATCCCGTTTTGTATGACTTTGGTGGAGAATTCGCAGACCACCAGATGCAACAAGAGGTATACATAAATACAGTATTGCTTTATTCATTGTATAGTTTATGAGTTTGCTTAATCCACAGAAAAGAAACTTACAAGTTACAACAATACATTGTACTGACACAACTAAAATAAAAAACTGCCCAGTTGGAAAAACCTGAAAATGTCTAGTAAATTTATGGGCATTCTCCTGGGTAAGTGTAACAAAGCTATATGAAAGTACCATCTGATTGTGTTGACTAGGCATAAATGAGGTTACTCTAAATATATGAACACTTAACTACCATCCTATGTTATCTGACTAAAATTGCTATATTTTACAACTGATGTGCATCATTTATAACCTTTACTAGTTTACCAGAGTTAGTCAATTTTTGGTGGCAAAAGAACAAAATGTAAAGGCCTGACAGGAACAGCACTATAACAAATTGGACAATCAATTTCATGATTTTTACTCACAGCAAACTGATGTGAAGGCAAGATCAATTTAAATAATATAGATATTTGATATTGATTGTATTTATTTGACAAAAGGAGATGGGGAGCATATCACACTCAATGCCATCTGTAATCCAATGCAATCACATTCAAACCACATCATATGAAGGTGCAATAAACAGCTTACAACAAGCCATGTATGGCCAAGGACCCTCCACATTTCCTCAGGTTTACCTTCCTTTTCTTCCATCTATAAATAAGTTGTATTTGCAAGTAAATTAGAGAAATATATCAGTTACCAGAAACATTGCAGTATTAAACCGAAACTTGTAAGAATTTGGTGTGAATGGGTTGGATAAGTTAACTAGAATAACACGTAGTGTATTCATCATTGTTAACAAAAGTTGTAAAAATAATATATTCGATTAAGTAGCTGTCAACTTTGTTGCATGATTGATCTCATCTTCCTTATCTTTTATATTAGATTCCCTTCTCTCTGATCAATCAAATTATACAATAGGAAGGTAAGAAAAGCAGAGAGATTTAGTTGGGCTGCCACTTGGGGTGTAAATGAGGAAGAGCTTCTTGAAAATTTGCCAGAGGATCTTCAGAGAGCTATTCGGCGTCACTTTTTTAAATTTTTTGAAAAGGTAAGAGGATTTTAAAAGATCATAACAAACCATTTTCGTTGTTTTAATTTTTTGGTTCGGATGCTAAATGATCTTAGTTGACATTGCTGAATTGATTTTTGCATGTATCTCTCATTGGTTATTAATTTTGGGTTTATTCACCAATTAGAATGATATTCTATTCACACTTATATAAGTAAATTTTGAATATATATGTTTGAACATGTAGCTGTGTTAAGCGTATCATATTTTGAGCAAGTAAATTTTTTTGAATGTGTATAATTTTCAAAGTTCTTACCAAGTGCATTTCAGTAAATTTTAAGTATGTATATCTCTGTTTTGAAGTGTATATCCATGTATAAATGGCTTCAAGTGTGCACATTTCACCTCTAGAAGTATATAGATCTTACACACACACAAATATGTGTGTGTGTGTTTGGCTTTTTAGAATCATATGATCTTTTTCCTTTTTTCTACTGTTTGCTAATTGAATAAAAAAAATAGTTCATAAAATATGGCATATTGTGTTCGCCAAGATAGTTAGATCATTTTGAAAATATTGGCCAAGTTTTATAAAGCGGTTTCCTCAATGAAGCCTTGATATCTGAGTTTTAGGTTATGTGGGAGTAAAGTTGTATAGTTTACTCCAGCTGCCACTTAGAAGGTTGTACCTTCAATGGAGTGTCTTGTGATATTAAAATTTGATAATTACGAAATAGAAGTAACATGTTGAGAATAATGTACATCTGCGAAATGATCATGTTCCTATATATATTGGATTAGAAAAGATGCGGTTTTAGGCATGAGAATTTTGAATAGACATTTAATCTCAAGGATTCGCATGAGCAGTTTCAGCATCAACTAGATGTAGTTTCATTCCAGCAAATGTTCTTAAGTGTCCCTATTCTATTTTTGGTTTAAGGCTTTCAGCATCACTATTTCTATACAAGGTGATGGAGTTGTTTTGCTGTGGATGATTGATACGAGGAAAAGAGAAATAGAGCCTGAAAAGAGAAAGCGACAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020254449.1	3.1e-23	transcription factor bHLH137-like
Swissprot	Q93W88.1	3.3e-22	bHLH transcription factor bHLH137
trEMBL	A0A7M3UQH8	1.1e-25	BHLH transcription factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G50915.1	61.45	9e-26	113		basic helix-loop-helix (bHLH) DNA-binding superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G00814	AT5G50915.2	83	32	0	31	113	148	230	61.45	9e-26	113
AfisC3G00814	AT5G50915.1	83	32	0	31	113	148	230	61.45	9e-26	113
AfisC3G00814	AT1G26260.3	66	16	1	31	96	184	248	74.24	7e-23	103

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00010.23	HLH	Domain	37	76	23.5	3.5e-05

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005887	C	integral component of plasma membrane
GO:0005249	F	voltage-gated potassium channel activity
GO:0005516	F	calmodulin binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046983	F	protein dimerization activity
GO:0009535	C	chloroplast thylakoid membrane
GO:0009624	P	response to nematode
GO:0009637	P	response to blue light
GO:0009739	P	response to gibberellin
GO:0009911	P	positive regulation of flower development
GO:0044212	F	transcription regulatory region DNA binding
GO:0030552	F	cAMP binding
GO:0030553	F	cGMP binding
GO:0040008	P	regulation of growth
GO:0042391	P	regulation of membrane potential
GO:0043565	F	sequence-specific DNA binding
GO:0048446	P	petal morphogenesis
GO:1902448	P	positive regulation of shade avoidance
GO:2000488	P	positive regulation of brassinosteroid biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network