result

Gene information

Detail information of AfisC3G00825

Location

Gene	Chr	Start	End	Strand
AfisC3G00825	chr3	150985463	150986557	-

Sequences

CDS

Protein

Gene

>AfisC3G00825
ATGTCTTTCGTGAAGGCCACATTGTTCTAGTCAGGTACATTATTTCAAATTTCCAGGCATTTTTTGTTGTCTTTCCAAATCTCGATTTATTTTTTCTCTAACTAGGCTAAATTATTTATCTCATTTCTTCTGTAATATCGAATAATGAATGTATTAAATTATATGATACTGAATTATATTTTGTTAAATGTATGCCAGAGTTGTCCAATAAATTAACATTTTCAGTTCAACTACTTGGATTACAAATTTACAACTTCGATTTTAACTCTGCATTGCTCTAATAAATCAAGTTCTCGGTTAGACCTTGTATTTACTAATACTGAAATGTTTAGTCCAATTTTGAATTTGTAATTAGTTTGTTGAAATAATTTTTATAATTAGGTTGCTGAAGCAGTTTGTATATTAGAAATGCTTACCGGAGTTTTGAATTTGTAATCTTTTTTTCTGAATGTATGAATTTGTAATCTGTTCGCTGAAGTTTTCCATATTTCTGAAATGTTAATAGCAGTTCTGAATACCTTTTCTAAGAACATGAACATATCTAAAGATCCTTCTGAAGTCCTATCACTAGAGCTCTCCCTCTCCATGACCGCAGACTTCTCAACCTCAACAGGTGATGAAAGTAGCACAGACAAACTAGAACCTTCTAGAACATTCCAGTGCAACTACTGCAACCGAAAGTTCTTCAGCTCTCAAGCACTAGGTGGCCATCAAAACGCACATAAAAGAGAGAGAATTCTTGCGAAAAGAGCCTTAAAAGTAGTTCACCCTTTTCCTTACTTTTACCCCAGCATTGCTTCTTTAGGTATAAAAGCACATTCTTCATCTATGTATCCAGTCACCGCGGCACCAGAGAGAAATAATATGTTTGCAGGAGGTTTGCTAAAGCCTGTTATGCCTGTGTATGTGGAACGGGACGAGGTTGAATTGTATTGGCCAGGAAGTTTTAAAGGTATCAAGGATGAGTATGATGAGCCTGATTTAAGTTTGAGGTTGTAACATGTAGATAGATATAGATGTGTGTTCCTAGTTTGCGCTGTATTTCATTCTGTTTTCATACATGATTCTTTTTTATTGCATAGCCAAATATATTTT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020257205.1	2.4e-29	zinc finger protein 7-like
Swissprot	Q39266.1	1.4e-21	Zinc finger protein 7
trEMBL	A0A5P1FAG4	1.7e-29	C2H2-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G24625.1	38.99	4e-24	107	ZFP7	zinc finger protein 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G00825	AT1G24625.1	159	80	6	1	149	23	174	38.99	4e-24	107
AfisC3G00825	AT1G66140.1	136	43	4	40	140	83	218	42.65	3e-20	94.0
AfisC3G00825	AT5G25160.1	102	38	3	12	99	33	132	47.06	6e-16	80.1

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13912.3	zf-C2H2_6	Domain	41	66	24.5	1.7e-05

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008270	F	zinc ion binding
GO:0009640	P	photomorphogenesis
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009740	P	gibberellic acid mediated signaling pathway
GO:0009909	P	regulation of flower development
GO:0010091	P	trichome branching
GO:0010582	P	floral meristem determinacy
GO:0044212	F	transcription regulatory region DNA binding
GO:0019760	P	glucosinolate metabolic process
GO:0022626	C	cytosolic ribosome
GO:0043565	F	sequence-specific DNA binding
GO:0046982	F	protein heterodimerization activity
GO:0048510	P	regulation of timing of transition from vegetative to reproductive phase
GO:0048581	P	negative regulation of post-embryonic development
GO:2000242	P	negative regulation of reproductive process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network