Detail information of AfisC3G00841


Location
GeneChrStartEndStrand
AfisC3G00841chr3153024569153029331-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPKU70791.12.0e-99PHD finger protein MALE MEIOCYTE DEATH 1
SwissprotQ7X6Y7.11.2e-80PHD finger protein MALE MEIOCYTE DEATH 1
trEMBLA0A8T3AFK98.3e-100PHD-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G66170.140.762e-85 314MMD1RING/FYVE/PHD zinc finger superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag450185.t1; g450189.t1
Allium fistulosumAfisC3G00841
Allium sativumAsa2G00749.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF04640.11PLATZFamily53060746.83e-12

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003006Pdevelopmental process involved in reproduction
GO:0003677FDNA binding
GO:0005634Cnucleus
GO:0006355Pregulation of transcription, DNA-templated
GO:0006996Porganelle organization
GO:0009653Panatomical structure morphogenesis
GO:0044703Pmulti-organism reproductive process
GO:0048869Pcellular developmental process
GO:0055046Pmicrogametogenesis
GO:1903046Pmeiotic cell cycle process

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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