result

Gene information

Detail information of AfisC3G01252

Location

Gene	Chr	Start	End	Strand
AfisC3G01252	chr3	220988031	220990772	-

Sequences

CDS

>AfisC3G01252
ATGGCGTTCTACTCGTCGTTCTTACTCTTATTGTTGTTGCTTCCGCTGTTTCCACTCAAAACATCGTGTCAAAATATAACTCTGGGCATAATTTTATCACCAATGACCAACCGCTCATATGTGCTTTCTCCCTCTGGAGATTTTGCATTGGGCTTCTATGCACTTGATACTGATCCCAACCTCTTTTTACTTGCTGTCTACTACTACAGAATCAATGGCAAAACTATAATATGGACTGCAAATGGAGACAATCCGGTGTCGAACAAATCCAAAGCTCAGCTTACATCAGATGGACAACTGACCTTACAAGACTCGTCAAACCTACAGATTTGGAGTTCAAATTCCGGTGGAGCAAGAGCAAGCTATGGTTCTATGCAGGATGATGGAAATTTCATACTCTACTCTAGTGGCTCTTCCGTTGTGTGGCAGACATTTGATTTTCCTACTGATACTATATTGCCTGGCCAAATACTGAAACAAAATACTAGTATCTTCTCAAAACTTACCGACGATGATTATTCAAAAGGAAGATTTAAGTTTATTATGCAGCTCGATGGAAATTTAGTTTTGTATAAGCTGGACTTTCCAACACAAACTGATGAGGACAACAACTTCTATTCTACAGCCACACAAAAGAATCCAGGAAAAACTAGCCTTGTGTTTAATCAGACTGGAAGTTTGTATGTTCTGTTTACTAATGGTTCTAGAGTAGCAGTGCTACCAGAACCTGTTCTAACGGGGGACAACTACTTGAGAGCAACTTTAGACCCAGATGGTGGTTTCAGGCGGTATTCCTTTCCAAAGGCGCAGCTAAGCACGGGAAGCTGGAGTATTGCAGCAAATCTTCTTCATAGTCTATGCAAAGTCGTACTTAAATCTGGAACTGGGATATGTGGCTCCAATAGTTACTGCACAAAATATGGCAGTGGACTAATCAATTGTCAGTGCCCTCCTCACTACTCTTTCATAGACCCAAGCAGAAAATACAAAGGTTGCAAACCAGATTATATTCCACAAACCTGCGAACAAGGCAGTGGATCAACTTTCGCTTTTGAAGTGATTAAGAATCTGGATTGGCCATCAACTGGTGCCCAAAAGCTTACTCCATTTAATGGAACTCAATGCCAAGATGAATGCCTGAATGATTGCCTTTGTTTGGTTGCTATATACTACAACAATGCAACTTGCTATATAAAAAAGCTCCCGCTTTCTAATGGAATATTAGAACAAAGTGTGAAGACAGTGGCTTACATCAAGTATAACAGGTTGAACACAAGTAATAATGGGTCAAGTAACGGGAAGAGTAACGAAAATAGTGATGGGTCAGGTAACTGGAAGATTTGGGCAATCATAGTATCATCAATTCTAGTTGGTTCTGTAGTACTATTTGGTGCTTGTTGCTGCATGTATTTTATAAGAAAACCTGAAAATGTTACACCAAAGACAAGCAGTATTGTTTCAATTTCAGCAACGTGCTCTTTCACATACAAAGAGCTGGAACAAGCTACCAAAGGATTCAGCGAAGAGATTGGTAAAGGCGCTTTTGGTGTAGTCTACAAAGGAGTCATGCCATCACAATCTAATGATAATAATACACTTATAGTAGCAGTCAAGAAATTAGAGGAAAGCCTGCTTGAAGAAGGGGATCAGGATTTCGAAAATGAAATTGCTACTATTGGCCAAACGCACCATAAAAATTTAGTACAGCTCATTGGATATTGTAAAGAAGGGTTGCATAGACTTATAGTGTTCGAGTTCCTTAGTAAAGGATCCCTTAATAAGTACATCTTCGGAAGCAATAGACCCGAGTGGAATCAAAGAGTACAAATTGCTTTAGGTATCGCAAATGGACTGGCGTATTTGCACGAACAGTGTAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTTTAGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGTTGGCAAAATTGTTAAGATTTGATCAAACGCGAACAGCCACGGGCATTAGAGGAACTATAGGCTATTTTGCACCTGAATGGTTCAAGAATGTTGGAATTAGCTCAAAGGTAGATGTTTATAGCTTTGGAGTGATGTTACTGCAAATAATTTGCTGTAAAAAGAAATTCGAGTGGGGATTAGAGAGTCATGAAAGAACGACTGTTATAGACTGGGCTAAGAACTGTTTAGCAAATGAAAGGTTAGATTTGTTAGTTGAGAATGACCAAGAGATAAAGAGTGATGTGATTACATTAAAAAGGTTTGTGATAGTTGGTATCTCCTGTGTTGAAGACGAGCCTTGGTTAAGACCCACTATGAAGAAGGTTGTGCAAATGCTGGAAGGAACATCCGAGTCCTCGATCCATTAG

Protein

Gene

>AfisC3G01252
AAAGCAGTCAACCATACAGAACATTGACTAGCTCTTCCTCCTAATTTAATTTTTAAAAGCTTCAGAGTCATCAACTTTAATTCAATGCATACATAATGCAACGAATCAAAACATTATCATTCAAATGGCGTTCTACTCGTCGTTCTTACTCTTATTGTTGTTGCTTCCGCTGTTTCCACTCAAAACATCGTGTCAAAATATAACTCTGGGCATAATTTTATCACCAATGACCAACCGCTCATATGTGCTTTCTCCCTCTGGAGATTTTGCATTGGGCTTCTATGCACTTGATACTGATCCCAACCTCTTTTTACTTGCTGTCTACTACTACAGAATCAATGGCAAAACTATAATATGGACTGCAAATGGAGACAATCCGGTGTCGAACAAATCCAAAGCTCAGCTTACATCAGATGGACAACTGACCTTACAAGACTCGTCAAACCTACAGATTTGGAGTTCAAATTCCGGTGGAGCAAGAGCAAGCTATGGTTCTATGCAGGATGATGGAAATTTCATACTCTACTCTAGTGGCTCTTCCGTTGTGTGGCAGACATTTGATTTTCCTACTGATACTATATTGCCTGGCCAAATACTGAAACAAAATACTAGTATCTTCTCAAAACTTACCGACGATGATTATTCAAAAGGAAGATTTAAGTTTATTATGCAGCTCGATGGAAATTTAGTTTTGTATAAGCTGGACTTTCCAACACAAACTGATGAGGACAACAACTTCTATTCTACAGCCACACAAAAGAATCCAGGAAAAACTAGCCTTGTGTTTAATCAGACTGGAAGTTTGTATGTTCTGTTTACTAATGGTTCTAGAGTAGCAGTGCTACCAGAACCTGTTCTAACGGGGGACAACTACTTGAGAGCAACTTTAGACCCAGATGGTGGTTTCAGGTTTGTTTTATATATAAATTAGAACTAATAAATGATAATACTCTGATACAGCTCAGTAATGCCAGCTTTACACAACAATTAATTAGTTAAGTATTTCAGGCGGTATTCCTTTCCAAAGGCGCAGCTAAGCACGGGAAGCTGGAGTATTGCAGCAAATCTTCTTCATAGTCTATGCAAAGTCGTACTTAAATCTGGAACTGGGATATGTGGCTCCAATAGTTACTGCACAAAATATGGCAGTGGACTAATCAATTGTCAGTGCCCTCCTCACTACTCTTTCATAGACCCAAGCAGAAAATACAAAGGTTGCAAACCAGATTATATTCCACAAACCTGCGAACAAGGCAGTGGATCAACTTTCGCTTTTGAAGTGATTAAGAATCTGGATTGGCCATCAACTGGTGCCCAAAAGCTTACTCCATTTAATGGAACTCAATGCCAAGATGAATGCCTGAATGATTGCCTTTGTTTGGTTGCTATATACTACAACAATGCAACTTGCTATATAAAAAAGCTCCCGCTTTCTAATGGAATATTAGAACAAAGTGTGAAGACAGTGGCTTACATCAAGTATAACAGGTTGAACACAAGTAATAATGGGTCAAGTAACGGGAAGAGTAACGAAAATAGTGATGGGTCAGGTAACTGGAAGATTTGGGCAATCATAGTATCATCAATTCTAGTTGGTTCTGTAGTACTATTTGGTGCTTGTTGCTGCATGTATTTTATAAGAAAACCTGAAAATGTTACACCAAAGACAAGCAGTATTGTTTCAATTTCAGCAACGTGCTCTTTCACATACAAAGAGCTGGAACAAGCTACCAAAGGATTCAGCGAAGAGATTGGTAAAGGCGCTTTTGGTGTAGTCTACAAAGGAGTCATGCCATCACAATCTAATGATAATAATACACTTATAGTAGCAGTCAAGAAATTAGAGGAAAGCCTGCTTGAAGAAGGGGATCAGGATTTCGAAAATGAAATTGCTACTATTGGCCAAACGCACCATAAAAATTTAGTACAGCTCATTGGATATTGTAAAGAAGGGTTGCATAGACTTATAGTGTTCGAGTTCCTTAGTAAAGGATCCCTTAATAAGTACATCTTCGGAAGCAATAGACCCGAGTGGAATCAAAGAGTACAAATTGCTTTAGGTATCGCAAATGGACTGGCGTATTTGCACGAACAGTGTAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTTTAGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGTTGGCAAAATTGTTAAGATTTGATCAAACGCGAACAGCCACGGGCATTAGAGGAACTATAGGCTATTTTGCACCTGAATGGTTCAAGAATGTTGGAATTAGCTCAAAGGTAGATGTTTATAGCTTTGGAGTGATGTTACTGCAAATAATTTGCTGTAAAAAGAAATTCGAGTGGGGATTAGAGAGTCATGAAAGAACGACTGTTATAGACTGGGCTAAGAACTGTTTAGCAAATGAAAGGTTAGATTTGTTAGTTGAGAATGACCAAGAGATAAAGAGTGATGTGATTACATTAAAAAGGTTTGTGATAGTTGGTATCTCCTGTGTTGAAGACGAGCCTTGGTTAAGACCCACTATGAAGAAGGTTGTGCAAATGCTGGAAGGAACATCCGAGTCCTCGATCCATTAGAAGATCTATCTCCGTTTTATGCTACTACCTTCTTACAACTAATGCGAACCGTGCTATACACACAAGGTTCACCATTTATTTCAGTTAATAGTGCGTTTTTATATATATTTTTTGTTATACGAAGCTGAAGACGCATGTTTGTGGATTGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241834.1	6.8e-237	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 isoform X1
Swissprot	Q7FAZ3.1	1.9e-175	OsRLCK134
trEMBL	A0A5P1FSN2	4.7e-232	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G60900.1	36.25	5e-133	472	RLK1	receptor-like protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01252	AT5G60900.1	800	392	20	7	781	11	717	36.25	5e-133	472
AfisC3G01252	AT1G34300.1	789	450	30	22	784	23	761	33.33	4e-97	353
AfisC3G01252	AT5G35370.1	819	444	28	39	782	48	806	29.30	2e-82	303

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	74	161	81.1	4.6e-23
PF07714.14	Pkinase_Tyr	Domain	506	779	164.3	2.9e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004672	F	protein kinase activity
GO:0005488	F	binding
GO:0016310	P	phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network