result

Gene information

Detail information of AfisC3G01258

Location

Gene	Chr	Start	End	Strand
AfisC3G01258	chr3	221919978	221922718	-

Sequences

CDS

>AfisC3G01258
ATGGCGTTCTACTCGTCGTTCTTACTCTTATTGTTGTTGCTTCCGCTGTTTCCACTCAAAACATCATGTCAAAATCTAACTCTGGGCATAATTGTATCACCATTAACCGACTCATATCTGCTTTCTCCCTCTGGAGATTTTGCATTGGGCTTCTATGCACTTGATACTGATCCCAACCTCTTTTTTCTTGCTGTCTACTACTACAGAATCAATGTCCAAACTATAATATGGACTGCAAATGGAGACAATCCGGTGTCGAACAAATCCAAAGCTCAGCTTACATCAGATGGACAACTGACCTTACAAGACTCGTCAAACCTACAGATTTGGAGTTCAAATTCCGGTGGAGCAAGAGCAAGCTATGGTTCTATGCAGGATGATGGAAATTTCATACTCTACTCTAGTGGCTCTTCCGTTGTGTGGCAGACATTTGATTTTCCTACTGATACTATATTGCCTGGCCAAATACTGAAACAAAATACTAGTATCTTCTCAAAACTTACCGACGATGATTATTCAAAAGGAAGATTTAAGTTTATTATGCAGCTCGATGGAAATTTAGTTTTGTATAAGCTGGACTTTCCAACACAAACTGATGAGGACAACAACTTCTATTCTACAGCCACACAAAAGAATCCAGGAAAAACTAGCCTTGTGTTTAATCAGACTGGAAGTTTGTATGTTCTGTTTACTAATGGTTCTAGAGTAGCAGTGCTACCAGAACCTGTTCTAACTGGGGACAGCTACTTGAGAGCAACTTTAGACCCAGATGGTGGTTTCAGGCAGTATTCCTTTCCAAAGGCGCTGCTAAGCACGGGAAGCTGGAGTATTGCAGCAAATCTTGTTCAAGATCTATGCAAAGTCGTACTTAAATCTGGAACTGGGATATGTGGCTCCAATAGTTACTGCACAAAATATTACAGTGGACTAATCAATTGTCAGTGCCCTCCTCACTACTCTTTCATAGACCCAAGCAGAAAATACAGAGGTTGCAAACCAGATTATATTCCACAACTCTGCGAACAAGGCAGTGGATCAACTTTCGCTTTTGAAATCGTTAAGAATCTGGATTGGCCGTCAACTGGTGCCCAAAAGCTTACTCCGTTTAATGAAACTCAATGCCAAGATGAATGCTTGAATGATTGCCTTTGTTTGGTTGCTATATACAACAACATTGCAACTTGCTATATAAAAAAGCTCCCGCTTTCTAATGGAATATCAGAACAAAGTGTGAATACAGTGGCTTACATCAAGTATAACAGATTGAACACTAGTAATAAAGGGTCAAGTAACGGGAAGAGTAACGAAAATAGTGATGGGTCAGGTAACTGGAAGAGTTGGGCAATCGTAGTATCATCAATTCTAGTTGGTTCTGTAGTACTAATTGGTGCTTGTTGCTGCATGTATTTTATAAGAAAACCTGAAAATGTTACACCAAAGACAAGCAGTATTGTTTCAATTTCAGCAACGTGCTCTTTCACATACAAAGAGCTGGAAGAAGCTACCAAAGGATTCAGCGAAGAGATTGGTAAAGGCGCTTTTGGTGTAGTCTACAAAGGAGTCATGCCATCACAATCTAATGATAATAATACACTTATAGTAGCAGTCAAGAAATTAGATGAAAGCCTGCTTGAAGAAGGGGATCAGGATTTCGAAAATGAAATCGCTACCATTGGCCAAACGCATCATAAAAATTTGGTGCAGCTCATTGGATTTTGTAAAGAAGGGTCGCATAGACTTATAGTGTTCGAGTTCCTTAGTAAAGGATCCCTTAATAAGTACATCTTCGGAAGCAATAGACCCGAGTGGAATCAAAGAGTACAAATTGCTTTAGGTATCGCAAATGGACTGGCGTATTTGCACGAACAGTGTAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTTTAGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGTTGGCAAAATTGTTAAGATTTGATCAAACGCGAACAGCCACGGGCATTAGAGGAACTATAGGCTATTTTGCACCTGAATGGTTCAAGAATGTTGGAATTAGCGCAAAGGTAGATGTTTATAGCTTTGGAGTGATGTTACTGCAAATAATTTGCTGTAAAAAGAAATTCGAGTGGGGATTAGAGAGTCATGAAAGAACGACTGTTATAGACTGGGCTAAGAACTGTTTAGCAAATGAAAGGTTAGATTTGTTAGTTGAGAATGACCAAGAAGCAAAGGGTGATGTGATTACATTAGAAAGGTTTGTGATAGTTGGTATCTCCTGTGTTGAAGACGAGCCTTGGTTAAGACCTACTATGAAGAAGGTTGTGCAAATGCTGGAAGGAACATCAGAGTCGTCGATCCATTAG

Protein

Gene

>AfisC3G01258
AAAGCAGTCAACCATACAGAACATTGACTAGCTCTTCCTCCTAATTTGATTTTTCAAAGCTTCAGAGTCATCAACTTCAATTCAATGCATACATAATGCAACGAATCAAAACATTATCATTCAAATGGCGTTCTACTCGTCGTTCTTACTCTTATTGTTGTTGCTTCCGCTGTTTCCACTCAAAACATCATGTCAAAATCTAACTCTGGGCATAATTGTATCACCATTAACCGACTCATATCTGCTTTCTCCCTCTGGAGATTTTGCATTGGGCTTCTATGCACTTGATACTGATCCCAACCTCTTTTTTCTTGCTGTCTACTACTACAGAATCAATGTCCAAACTATAATATGGACTGCAAATGGAGACAATCCGGTGTCGAACAAATCCAAAGCTCAGCTTACATCAGATGGACAACTGACCTTACAAGACTCGTCAAACCTACAGATTTGGAGTTCAAATTCCGGTGGAGCAAGAGCAAGCTATGGTTCTATGCAGGATGATGGAAATTTCATACTCTACTCTAGTGGCTCTTCCGTTGTGTGGCAGACATTTGATTTTCCTACTGATACTATATTGCCTGGCCAAATACTGAAACAAAATACTAGTATCTTCTCAAAACTTACCGACGATGATTATTCAAAAGGAAGATTTAAGTTTATTATGCAGCTCGATGGAAATTTAGTTTTGTATAAGCTGGACTTTCCAACACAAACTGATGAGGACAACAACTTCTATTCTACAGCCACACAAAAGAATCCAGGAAAAACTAGCCTTGTGTTTAATCAGACTGGAAGTTTGTATGTTCTGTTTACTAATGGTTCTAGAGTAGCAGTGCTACCAGAACCTGTTCTAACTGGGGACAGCTACTTGAGAGCAACTTTAGACCCAGATGGTGGTTTCAGGTTTGTTCTATATATAAATTAGAACTAATAAATGATAATACTCTGATACAGCTCAGTAATTCCAGCTTTACACAACAATTAATTTGTTAAATATTTCAGGCAGTATTCCTTTCCAAAGGCGCTGCTAAGCACGGGAAGCTGGAGTATTGCAGCAAATCTTGTTCAAGATCTATGCAAAGTCGTACTTAAATCTGGAACTGGGATATGTGGCTCCAATAGTTACTGCACAAAATATTACAGTGGACTAATCAATTGTCAGTGCCCTCCTCACTACTCTTTCATAGACCCAAGCAGAAAATACAGAGGTTGCAAACCAGATTATATTCCACAACTCTGCGAACAAGGCAGTGGATCAACTTTCGCTTTTGAAATCGTTAAGAATCTGGATTGGCCGTCAACTGGTGCCCAAAAGCTTACTCCGTTTAATGAAACTCAATGCCAAGATGAATGCTTGAATGATTGCCTTTGTTTGGTTGCTATATACAACAACATTGCAACTTGCTATATAAAAAAGCTCCCGCTTTCTAATGGAATATCAGAACAAAGTGTGAATACAGTGGCTTACATCAAGTATAACAGATTGAACACTAGTAATAAAGGGTCAAGTAACGGGAAGAGTAACGAAAATAGTGATGGGTCAGGTAACTGGAAGAGTTGGGCAATCGTAGTATCATCAATTCTAGTTGGTTCTGTAGTACTAATTGGTGCTTGTTGCTGCATGTATTTTATAAGAAAACCTGAAAATGTTACACCAAAGACAAGCAGTATTGTTTCAATTTCAGCAACGTGCTCTTTCACATACAAAGAGCTGGAAGAAGCTACCAAAGGATTCAGCGAAGAGATTGGTAAAGGCGCTTTTGGTGTAGTCTACAAAGGAGTCATGCCATCACAATCTAATGATAATAATACACTTATAGTAGCAGTCAAGAAATTAGATGAAAGCCTGCTTGAAGAAGGGGATCAGGATTTCGAAAATGAAATCGCTACCATTGGCCAAACGCATCATAAAAATTTGGTGCAGCTCATTGGATTTTGTAAAGAAGGGTCGCATAGACTTATAGTGTTCGAGTTCCTTAGTAAAGGATCCCTTAATAAGTACATCTTCGGAAGCAATAGACCCGAGTGGAATCAAAGAGTACAAATTGCTTTAGGTATCGCAAATGGACTGGCGTATTTGCACGAACAGTGTAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTTTAGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGTTGGCAAAATTGTTAAGATTTGATCAAACGCGAACAGCCACGGGCATTAGAGGAACTATAGGCTATTTTGCACCTGAATGGTTCAAGAATGTTGGAATTAGCGCAAAGGTAGATGTTTATAGCTTTGGAGTGATGTTACTGCAAATAATTTGCTGTAAAAAGAAATTCGAGTGGGGATTAGAGAGTCATGAAAGAACGACTGTTATAGACTGGGCTAAGAACTGTTTAGCAAATGAAAGGTTAGATTTGTTAGTTGAGAATGACCAAGAAGCAAAGGGTGATGTGATTACATTAGAAAGGTTTGTGATAGTTGGTATCTCCTGTGTTGAAGACGAGCCTTGGTTAAGACCTACTATGAAGAAGGTTGTGCAAATGCTGGAAGGAACATCAGAGTCGTCGATCCATTAGAAGATCTATCTCCGTTTTATGCTACTACCTCCTTACAACTAATGCAAACTCGTGCTATACACACAAGGTTCACCATTTATTTCAGTTAACAGTGCGTTTTTATATTATTATTTTTGTTATACAAAGCTGAAGATGCATGTTTGTGGATTGTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241714.1	2.0e-236	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2
Swissprot	Q7FAZ3.1	5.5e-175	OsRLCK134
trEMBL	A0A5P1FSN2	1.9e-233	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G60900.1	36.27	7e-132	468	RLK1	receptor-like protein kinase 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01258	AT5G60900.1	805	389	20	6	780	7	717	36.27	7e-132	468
AfisC3G01258	AT1G34300.1	763	442	26	42	783	44	761	33.42	9e-95	345
AfisC3G01258	AT2G19130.1	798	440	30	37	783	35	771	30.83	2e-84	310

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	73	160	81.6	3.3e-23
PF07714.14	Pkinase_Tyr	Domain	505	778	163.7	4.5e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0004672	F	protein kinase activity
GO:0005488	F	binding
GO:0016310	P	phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network