result

Gene information

Detail information of AfisC3G01267

Location

Gene	Chr	Start	End	Strand
AfisC3G01267	chr3	223538826	223541593	-

Sequences

CDS

>AfisC3G01267
ATGGCATTCCAGTCACATATCTTGCTATTTTTGTTGCTAATTCTGCTGCTTTCACTCAACGTATCATGCCAAAATAGCAACACAAATATAAGTTTGGGTACAATTTTGTCTCCAACCACTAACAGTTCATCTCTGCTCTCCCCCTCTGGAGACTTTGCTTTCGGCTTCCGTGCACTTGATACGGACCCTTCCCTCTTCGTACTCGCCGTCTACTACAACAAAATCAGGCCCAAAACTGTTATATGGACTGCAAATGGAGGCAATCCCGTGTCAAACGAATCCAAAGCTCAACTTACCTCAGGCGGACAACTGACCTTGCAAGACTCCTCAAACCAACAAATATGGAGTTCAAATATTAGTGGAGCAAGCTATGGTTTTATGCAAGATAATGGAAATTTTATACTGTCTAGTGGCTCTTCTGTCTTATGGCAGCCATTTGATTCTCCAACCGACACTATATTGCCTGGCCAGATTTTGAACCAAGACACTACTATTTATGCAAAACTCGCGGAAGATAATTATTCAATGGGAAGATTTAAGCTTACATTGCAAACCGATGGAGATTTGGTGTCGTATGCAGTGGGCTTTCCAACCACAATTCAATATGACAGCTACTATTCCACCAATACAGCTGGGAATATAGGAAATAATCGGCTTCTGTTTAATGAGACTGGAAGTTTGTATCTTCTGTTTAGTAATGCTTCTACTGTACCACTGCTATCAAAACCTGTTGTCACAGGAGACAACTACATGAGAGCTACTTTGGACCCCGATGGTGGTTTCAGGCAGTATACCTTTCCGAAAACTCAGCCAAGCACTGGAAGCTGGAGTATCACAGGAAATCTTATTCAAAATTTATGCAGCAGGACTTTTAACCTTGGAAGTGGGATATGTGGTTACAATGGTTACTGCACACAAAGCGACAGTGGATTAACCAATTGTCAATGCCCACCTCACTACACTTTCATAGACCAAACCAGAAAATACAAAGGCTGCACACCAGATTACACCCCACAACTCTGCAAAGAAGGCAGTGGATCGTCTTTTGCATTCGAAGCTGTGAAGCGTCTGAATTGGCCATTTTCTGATGCAGATAAGCTTGGTCCAATGAACCAAAGCCAATGCCAAGATGAATGCTTGGATGATTGCTTTTGCACAGTTGCTATACACAACAATGGTGGAGATTGCTGGAAAAAGAAGTCTCCACTTTCTAATGGGATATTACAGCAAAATGATGATGGTACGGTGGCATTGATCAAGTACAATAAATTGAAAGCAAGTAGTGATGGGCCAGGTAACTGGAAGAGCAATGTAAGTAGTGATGGGTCAGGTAACTGGAAGAGACCGGTAATCATAGTATTTTCAATTCTAGTTTGTTCTGTGATTTCAAACCTTTTACTGATTGGTGCGTGTTTCTATTGGTATAAAAAAAGAAATCGTGAAAGGAATTTGACAAATATAAGTAGCGCTGTTCCAGTTTCAGCATCATGCTCTTTCACATACAAAGAGCTGGAACACGCTACCAAAGGATTTAGCGAAGAGCTCGGAAAAGGAGCTTTTGGTGCAGTCTATAAAGGAGTTCTGTCATCACGGTCTAATGGTAGAACACTTGTAGCTGTCAAGAAATTAGATGAAAGCCTGCTAGAACAAGGGGAAAAGGATTTCGAAAATGAAGTCGCAACTATTAGTCAAACACATCATAAAAATCTAGTTCAGCTTCTTGGGTTTTGCAAAGAAGGGTCCCATAGGCTTATAGTGCTTGAGTTCATGAGCAAAGGATCACTTAATAAGTTCATCTTCGGAAGCAATCGACCTAACTGGAATCAAAGGGTACAAATTATTCTTGGTATTGCAAATGGACTGGCGTATTTGCATGAACAATGTAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTTTAGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGCTGGCAAAGTTGTTAAGGTTCGATCAAACACGAACCGCCACGGGCATTAGAGGGACCATAGGTTATTTTGCACCTGAATGGTTTAAGAATAGTGGAATCAGTGCAAAGGTTGATGTTTATAGCTTTGGAGTTATGTTACTGCAAATAGTTTGTTGTAAAAAGAAATTTGAGTGGGGATTACAGAGTCATGAGAGAACAACAATTATAGACTGGGCAACAAACTGTTTAGAAAATGAAAGGTTGGATTTATTGGTGAAGGATGATGAAGAGGCAAAGAGTGATGGAATTAGATTAGAAAGGCTTGTAATGGTTGGTATTTCTTGCGTTGAAGATGAACCTTCGTTAAGGCCTACTATGAAGAAGGTTGTACAAATGTTGGAAGGAACAGCTGTGTTCACTATCCATTAG

Protein

Gene

>AfisC3G01267
AAGTAAGCCACCAGTGAATTAATGCATAGGAATCATGAATTGATCTCAACTATTGTTGTTGAAGAACATTGACCATCTCTCTTATAATTTATATTTGGCAAAGGCATCGCCTTCGTTTCGATGCATACAAATCACCAAGAAGCATACCTTGCTATTTTTGTTAGCCCATCATAGGTGCAAATGGCATTCCAGTCACATATCTTGCTATTTTTGTTGCTAATTCTGCTGCTTTCACTCAACGTATCATGCCAAAATAGCAACACAAATATAAGTTTGGGTACAATTTTGTCTCCAACCACTAACAGTTCATCTCTGCTCTCCCCCTCTGGAGACTTTGCTTTCGGCTTCCGTGCACTTGATACGGACCCTTCCCTCTTCGTACTCGCCGTCTACTACAACAAAATCAGGCCCAAAACTGTTATATGGACTGCAAATGGAGGCAATCCCGTGTCAAACGAATCCAAAGCTCAACTTACCTCAGGCGGACAACTGACCTTGCAAGACTCCTCAAACCAACAAATATGGAGTTCAAATATTAGTGGAGCAAGCTATGGTTTTATGCAAGATAATGGAAATTTTATACTGTCTAGTGGCTCTTCTGTCTTATGGCAGCCATTTGATTCTCCAACCGACACTATATTGCCTGGCCAGATTTTGAACCAAGACACTACTATTTATGCAAAACTCGCGGAAGATAATTATTCAATGGGAAGATTTAAGCTTACATTGCAAACCGATGGAGATTTGGTGTCGTATGCAGTGGGCTTTCCAACCACAATTCAATATGACAGCTACTATTCCACCAATACAGCTGGGAATATAGGAAATAATCGGCTTCTGTTTAATGAGACTGGAAGTTTGTATCTTCTGTTTAGTAATGCTTCTACTGTACCACTGCTATCAAAACCTGTTGTCACAGGAGACAACTACATGAGAGCTACTTTGGACCCCGATGGTGGTTTCAGGTAATTTGTTATAATTTGAACTGATGGTACTATGATATAGCTCAATATTATAGCAATCAGTTAAATATTTCAGGCAGTATACCTTTCCGAAAACTCAGCCAAGCACTGGAAGCTGGAGTATCACAGGAAATCTTATTCAAAATTTATGCAGCAGGACTTTTAACCTTGGAAGTGGGATATGTGGTTACAATGGTTACTGCACACAAAGCGACAGTGGATTAACCAATTGTCAATGCCCACCTCACTACACTTTCATAGACCAAACCAGAAAATACAAAGGCTGCACACCAGATTACACCCCACAACTCTGCAAAGAAGGCAGTGGATCGTCTTTTGCATTCGAAGCTGTGAAGCGTCTGAATTGGCCATTTTCTGATGCAGATAAGCTTGGTCCAATGAACCAAAGCCAATGCCAAGATGAATGCTTGGATGATTGCTTTTGCACAGTTGCTATACACAACAATGGTGGAGATTGCTGGAAAAAGAAGTCTCCACTTTCTAATGGGATATTACAGCAAAATGATGATGGTACGGTGGCATTGATCAAGTACAATAAATTGAAAGCAAGTAGTGATGGGCCAGGTAACTGGAAGAGCAATGTAAGTAGTGATGGGTCAGGTAACTGGAAGAGACCGGTAATCATAGTATTTTCAATTCTAGTTTGTTCTGTGATTTCAAACCTTTTACTGATTGGTGCGTGTTTCTATTGGTATAAAAAAAGAAATCGTGAAAGGAATTTGACAAATATAAGTAGCGCTGTTCCAGTTTCAGCATCATGCTCTTTCACATACAAAGAGCTGGAACACGCTACCAAAGGATTTAGCGAAGAGCTCGGAAAAGGAGCTTTTGGTGCAGTCTATAAAGGAGTTCTGTCATCACGGTCTAATGGTAGAACACTTGTAGCTGTCAAGAAATTAGATGAAAGCCTGCTAGAACAAGGGGAAAAGGATTTCGAAAATGAAGTCGCAACTATTAGTCAAACACATCATAAAAATCTAGTTCAGCTTCTTGGGTTTTGCAAAGAAGGGTCCCATAGGCTTATAGTGCTTGAGTTCATGAGCAAAGGATCACTTAATAAGTTCATCTTCGGAAGCAATCGACCTAACTGGAATCAAAGGGTACAAATTATTCTTGGTATTGCAAATGGACTGGCGTATTTGCATGAACAATGTAGGAACCAGATTATACATTGTGATATAAAGCCTCAAAATATACTTTTAGATGAGAATATGGAAGCTAGAATCTCAGACTTTGGGCTGGCAAAGTTGTTAAGGTTCGATCAAACACGAACCGCCACGGGCATTAGAGGGACCATAGGTTATTTTGCACCTGAATGGTTTAAGAATAGTGGAATCAGTGCAAAGGTTGATGTTTATAGCTTTGGAGTTATGTTACTGCAAATAGTTTGTTGTAAAAAGAAATTTGAGTGGGGATTACAGAGTCATGAGAGAACAACAATTATAGACTGGGCAACAAACTGTTTAGAAAATGAAAGGTTGGATTTATTGGTGAAGGATGATGAAGAGGCAAAGAGTGATGGAATTAGATTAGAAAGGCTTGTAATGGTTGGTATTTCTTGCGTTGAAGATGAACCTTCGTTAAGGCCTACTATGAAGAAGGTTGTACAAATGTTGGAAGGAACAGCTGTGTTCACTATCCATTAGAAGATGCATCTCAATTTTGACTGAAATAATGATATTAGGTCCTTAGATATTTAAAATGAACGGTTATTTTGAAATTCAACGATATAGATCACAACTTAAGGAGCGATATCATAACTTAAGGATGTAAGGCAGATTAACT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241714.1	1.8e-237	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2
Swissprot	Q7FAZ3.1	1.4e-181	OsRLCK134
trEMBL	A0A5P1FSN2	3.0e-234	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34300.1	32.66	3e-94	343		lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01267	AT1G34300.1	796	439	28	26	784	23	758	32.66	3e-94	343
AfisC3G01267	AT5G60900.1	287	123	2	499	785	437	718	55.40	2e-89	327
AfisC3G01267	AT5G60900.1	455	255	13	7	433	8	428	30.33	9e-53	205

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	78	162	72.4	2.4e-20
PF07714.14	Pkinase_Tyr	Domain	511	782	172.8	7.2e-51

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0004672	F	protein kinase activity
GO:0005488	F	binding
GO:0016310	P	phosphorylation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network