result

Gene information

Detail information of AfisC3G01367

Location

Gene	Chr	Start	End	Strand
AfisC3G01367	chr3	242785065	242786759	+

Sequences

CDS

Protein

Gene

>AfisC3G01367
ATGAAAGTAGTCCATAAAGAAAAGGTGATTAGGGTTAACATGATGGAGCAGATTAAGAGGGAGATTTTGGTGATGAAAATGGTTTCCCATCCGAATATTGTTGAACCGCATAAAGTTATGGCCATCAAATCGAAGATATTTTTTGCTATGGAGCTGGTCAGAGGTGGGGAGTTGTTTTATAGGATTGCTAGCATGGGAGGTTAAAGGAGCACTGTGCTAGAAATTACTTTAGGCTGCTTGTTTCTGATGTTGATTTTTGTCATATCCGGGGAGTTTATCACAGAGATCCGAAGCCAGAGAATTTGTTGCTTGATGACAAGGTAAATTAAGGGTTCGATAGTCTTTAGTGATTTATCTGCAAATTTCGGTCATTTGATTTCGGATATGCCATTGATTTTCTGTTTTTTATGAGTTGCTTGACATATACATATGTACTAAAAGACACTTGGTAAAAATGCTCCTTTGTTAGATTCGTGGTACCTCACTGTTAAGAAACATACAAAATTAGTAGTGCCCTTAACACATTGTTAAATGATTTTGTGATGTATCCATTGCTAACTGATCAATTATTTTGGTTTTGAGTTGTGATTATTGAGAAATAGTTTGTTCCTAATTGTGTAGGAAATTTAAAGATAGATGACTTTGGTATTAGTGCATTTGCTGGAGCAGACGGTTTGCTCCATATGACATGTGGGACTCCAGCATATGCAGCACCTGAGGTTGCTGAAAGGAAAGGATATGATGGTGTAAAGGCTGATATATGGTCCTGTGGAGTCATCTTGTATGTCTTACTAGCTGGTTCTCTTCCATTTCAGGTATAGTTGCATGCTTGTTAAATGAAATAAAAGTTCAATTGTGTATTTTTATACTGTTCATCATCTTCATTCAGTAGGATTGTTTTTAGTATTAGTGGAAACTCTGTTAGCTGCTCGTTCCATATATATAGCAATGGCATAGACCATTGTATTGTTTATAAAATGGTACTTAGAAAATTATGAGCATAGCTATTGCATTTTCGTCGATTCATTAGTACTACCTAACTTTCATTAATAAATACAAAAACCTCGTTTATTTTTGTTATTTCCTAAATGTTTTGAAATCCCTCTTTTATTTCGGATAAGAAATGGTTGTGTATACTAAAGAAATATCATAATTCTACATAGATAAGCTGGAATTTGAAAAGGTATTTGTTCACCACCTGAAACATTCTCTTTTCCATGGTCAATTCGAAAAAGCTTTGAATAAACACTATAAAGTTTCTTGCCTCTAAAAAAACCATGTTCATTTCTTTTATCCGTGGTGCTTTTTAGCCTATAGTTTTATTAACTTTCTATTGTGGTTTGCACAAAATTGTTCCTTTTAAACCTTAAATTGTTGTACTATTTCAAAATACAGGATGACAATCTTGTGACCATGTACCGAAAAATCCATATAGGTGACTTCAAATGCCCTTCATGGTTCTCTTCTGATGCTCGTTGCCTAGTCACCAGACTCCTTGACTCAAACCCGAAAACCCATATTTCCGTTGAAAAAATTATCGATTCTCCTTGGTTCAAAAAATCTCCGATGCCACCACCACATCCACCAAAGAAAGAAATCGATGATACCCCTGAAATCTTCAATGAATTTCATCTAATTTCCCTTTCACAAGGCTTTAACCTTTCTCCTCTATTCGAAGATGACTCAAAAGGATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020675333.1	1.2e-80	CBL-interacting protein kinase 6-like
Swissprot	Q6Z9F4.1	2.0e-77	OsCIPK06
trEMBL	A0A2I0WS93	8.5e-81	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G30960.1	54.65	3e-76	281	ATCIPK6;CIPK6;SIP3;SNRK3.14	SOS3-interacting protein 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01367	AT4G30960.1	269	64	5	14	224	65	333	54.65	3e-76	281
AfisC3G01367	AT5G45820.1	287	96	6	1	229	40	326	46.34	5e-65	243
AfisC3G01367	AT5G58380.1	311	99	4	1	229	40	350	41.80	2e-62	235

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	1	63	30.8	1.7e-07
PF00069.22	Pkinase	Domain	67	184	82.1	3.6e-23
PF03822.11	NAF	Domain	203	226	31.2	1.7e-07

Gene Ontology

Accession	Ontology	Name
GO:0000166	F	nucleotide binding
GO:0005515	F	protein binding
GO:0050832	P	defense response to fungus
GO:0004672	F	protein kinase activity
GO:0007165	P	signal transduction
GO:0005986	P	sucrose biosynthetic process
GO:0006468	P	protein phosphorylation
GO:0006979	P	response to oxidative stress
GO:0007275	P	multicellular organism development
GO:0009268	P	response to pH
GO:0009414	P	response to water deprivation
GO:0009507	C	chloroplast
GO:0009737	P	response to abscisic acid
GO:0010325	P	raffinose family oligosaccharide biosynthetic process
GO:0010540	P	basipetal auxin transport
GO:0018193	P	peptidyl-amino acid modification
GO:0019593	P	mannitol biosynthetic process
GO:0042538	P	hyperosmotic salinity response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network