result

Gene information

Detail information of AfisC3G01429

Location

Gene	Chr	Start	End	Strand
AfisC3G01429	chr3	257279255	257280148	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	KAF3328869.1	2.3e-89	AP2/ERF and B3 domain-containing transcription repressor RAV2-like protein
Swissprot	Q8RZX9.1	1.3e-84	AP2/ERF and B3 domain-containing protein Os01g0693400
trEMBL	A0A833QT19	1.7e-89	AP2/ERF and B3 domain-containing transcription repressor RAV2-like protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G68840.1	60.28	2e-87	318	AtRAV2;EDF2;RAP2.8;RAV2;TEM2	related to ABI3/VP1 2

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Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	28	75	34.3	1.9e-08
PF02362.18	B3	Family	152	237	100.3	4.1e-29

Gene Ontology

Accession	Ontology	Name
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009536	C	plastid
GO:0009741	P	response to brassinosteroid
GO:0009910	P	negative regulation of flower development
GO:0044212	F	transcription regulatory region DNA binding
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0043565	F	sequence-specific DNA binding
GO:0048366	P	leaf development
GO:0048527	P	lateral root development
GO:0048573	P	photoperiodism, flowering
GO:0080113	P	regulation of seed growth

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09287	RAV; RAV-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network