Detail information of AfisC3G01492


Location
GeneChrStartEndStrand
AfisC3G01492chr3266569901266606044-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020257693.16.0e-83homeobox protein HOX1A-like
SwissprotQ8H991.17.3e-70Homeobox protein HOX1A homolog
trEMBLA0A5P1FBW14.3e-83Homeobox protein HOX1A

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G19510.155.332e-65 247HAT3.1Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag287598.t1
Allium fistulosumAfisC3G01492
Allium sativumAsa2G01302.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00628.26PHDDomain40946439.24.4e-10
PF00046.26HomeoboxDomain66270342.44.1e-11

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0046872Fmetal ion binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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