result

Gene information

Detail information of AfisC3G01516


Location
GeneChrStartEndStrand
AfisC3G01516chr3272319891272320540+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrTYJ03337.11.5e-09hypothetical protein E1A91_A12G020800v1
SwissprotQ9SSW1.11.6e-08Zinc-finger protein 1
trEMBLA0A8J5IQS74.9e-10Zinc finger protein ZAT10

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G67450.136.611e-1164.7AZF1;ZF1zinc-finger protein 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
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Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13912.3zf-C2H2_6Domain174147.88.3e-13
PF13912.3zf-C2H2_6Domain647716.60.0051

Gene Ontology
AccessionOntologyName
GO:0001047Fcore promoter binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005634Cnucleus
GO:0006979Presponse to oxidative stress
GO:0008270Fzinc ion binding
GO:0009409Presponse to cold
GO:0009414Presponse to water deprivation
GO:0009611Presponse to wounding
GO:0009644Presponse to high light intensity
GO:0009651Presponse to salt stress
GO:0009737Presponse to abscisic acid
GO:0010117Pphotoprotection
GO:0010200Presponse to chitin
GO:0015979Pphotosynthesis
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0035264Pmulticellular organism growth
GO:0043565Fsequence-specific DNA binding
GO:0055062Pphosphate ion homeostasis
GO:2000280Pregulation of root development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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