Detail information of AfisC3G01518
| Gene | Chr | Start | End | Strand |
|---|
| AfisC3G01518 | chr3 | 272609239 | 272619221 | + |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_020100376.1 | 8.9e-254 | FACT complex subunit SSRP1 |
| Swissprot | O04235.1 | 1.9e-229 | Recombination signal sequence recognition protein 1 |
| trEMBL | A0A6P5FVL8 | 6.4e-254 | FACT complex subunit SSRP1 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT3G28730.1 | 64.90 | 0.0 | 818 | ATHMG;HMG;NFD;SSRP1 | high mobility group |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| AfisC3G01518 | AT3G28730.1 | 678 | 201 | 8 | 1 | 674 | 1 | 645 | 64.90 | 0.0 | 818 |
| AfisC3G01518 | AT3G51880.2 | 113 | 45 | 2 | 546 | 657 | 33 | 121 | 38.05 | 3e-08 | 57.8 |
| AfisC3G01518 | AT4G11080.1 | 73 | 44 | 1 | 586 | 658 | 242 | 312 | 36.99 | 4e-08 | 57.0 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF03531.11 | SSrecog | Domain | 76 | 296 | 247.1 | 1.1e-73 |
| PF08512.9 | Rtt106 | Domain | 354 | 470 | 70.2 | 1.4e-19 |
| PF00505.16 | HMG_box | Domain | 590 | 658 | 74.6 | 5.5e-21 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K09272 | SSRP1; structure-specific recognition protein 1 | EC:- | - | - |