result

Gene information

Detail information of AfisC3G01610

Location

Gene	Chr	Start	End	Strand
AfisC3G01610	chr3	285245708	285248028	-

Sequences

CDS

>AfisC3G01610
ATGGCGATGGAGATCATATTAGTGTCTACATTGATCATATCGCTATTAATATTTCTTGGATTTAGAAGCAATGGGAAAACGGAGAGAAAATTGCTGCCTACACTTCCACCAGGCAATCTTGGAGGTTGGCCATTCATCGGTGACACCATTCCGTTTATGACGCCTCATTCTTCTGCTTTGTTGGGCACTTACATTGATCAAAATATTTCCAAATATGGGAGGATATTTCGAATGAACTTGTTAGGAAAGGCAACGATCGTGTCTGTAGACCCTGATTTCAACAGATATATTCTACAGAATGAAGGAAGATTGTTTGAAAACAGCTGCCCAACGAGCATTAAAGAGATTTTGGGAAAATGGTCTATGCTTGCATTAGCTGGGGATATACATAGAGAAATGAGATCCATTGCTGTGAATTTCATGAACAGTGTTAAGCTTAGAACTTATTTTTTGAAGGATATTGATATTCAGGCTGTTAATATTCTTGATGCTTGGAAGGTCAACTCTACTTTCTCTGCACAGGATGAAGGAAAGAAGTTTGCATTTAACCTCATGGTGAAGCATCTAATGAATATGGATCCTGGAATGCCAGAGACAGAAGAAATCAGAAAAGAGTACATTTTCTTCATGGAGGGGATGGCTTCCATTCCTTTAAACTTTCCTGGAACAGCCTACAGAAGAGCTTTACAGTCAAGGTCCAGGATTCTGGCAATAATGGGGCAAAAGCTTGACGAAAGGATGCAGAAAATAAAAGAAGGCTGTAAAGGACTGGAAGAAGAGGATCTTCTTGCCTCAGTTGCAAGAAATACTAACATAACAAGAGACCAGATTCTTGATTTGATGATCAGCATGCTTTTTGCTGGTCATGAAACTTCTTCTGCCGCCATTTCTCTTGCCATTTATTTCCTTCAAGCTTCCCCTGATGTTCTTAAAAAGCTTCGAGAGGAGCACATAAAGATTGCAAAACAAAAGAAAGAAAGGAGCGAAACTGGATTGAATTGGGATGATTACAAGCAAATGGAATTCACAAACTGCGTAATTCATGAAACCCTAAGATTAGGCAACATCGTTAAGTTTTTGCATCGGAAAACCATCAAAGATGTTCAATACAAAGGTTATGAAATTCCATGTGGTTGGGAAGTAGTGCCGATCATCTCAGCAGCACATTTGGATTCTTCTATCTTTGACAACCCACAAAGCTATGATCCTTCGAGGTGGGAGGCGATATTTTCAGCAGGAGCAAAGAGCAATATAATGTCATTCAGCGGTGGACCTCGGTTATGTCCAGGAGCAGAGTTGGCGAAACTGGAGATGGCTATTTTTCTTCATCATCTTGTACAGAGGTTCGACTGGGAATTGGTGGAGAAGGATAACCCTGTATCATTCCCCTTCCTTGGATTTCCCAAGAAATTGCCTATCAAAATCACAGCTCTTAAACATTGA

Protein

Gene

>AfisC3G01610
CAAGGAGTAGGTTTTTCATTCTTTATAGATCTCTATATAAGTACGAAGTGCACTTGAGGTTAGCATTAAAATAAAAGTGAAATGGCGATGGAGATCATATTAGTGTCTACATTGATCATATCGCTATTAATATTTCTTGGATTTAGAAGCAATGGGAAAACGGAGAGAAAATTGCTGCCTACACTTCCACCAGGCAATCTTGGAGGTTGGCCATTCATCGGTGACACCATTCCGTTTATGACGCCTCATTCTTCTGCTTTGTTGGGCACTTACATTGATCAAAATATTTCCAAGTAATTATTCAAAATAACTCATCATATTACTTTGTTTATTGAAGCTTAATATATGTACTGAGCTTTGTTAATGTTTGCACAAGATATGGGAGGATATTTCGAATGAACTTGTTAGGAAAGGCAACGATCGTGTCTGTAGACCCTGATTTCAACAGATATATTCTACAGAATGAAGGAAGATTGTTTGAAAACAGCTGCCCAACGAGCATTAAAGAGATTTTGGGAAAATGGTCTATGCTTGCATTAGCTGGGGATATACATAGAGAAATGAGATCCATTGCTGTGAATTTCATGAACAGTGTTAAGCTTAGAACTTATTTTTTGAAGGATATTGATATTCAGGCTGTTAATATTCTTGATGCTTGGAAGGTCAACTCTACTTTCTCTGCACAGGATGAAGGAAAGAAGGTACCTCATTTGTATATATGCTTCATATAGATGTTTTTCTTAAGATACAAAAAGAGCAAAAATTTGAAGTTCCAGGTTTCTAATTTTATGTCCATGAACTGTTAGCAAATGTTGTTACTTCCTCTTTATGAATTTTGATTTAATGTAAAAGTTATCATAATCTTATTGCTCTTTTTTACAAATGAATGCAGTTTGCATTTAACCTCATGGTGAAGCATCTAATGAATATGGATCCTGGAATGCCAGAGACAGAAGAAATCAGAAAAGAGTACATTTTCTTCATGGAGGGGATGGCTTCCATTCCTTTAAACTTTCCTGGAACAGCCTACAGAAGAGCTTTACAGGTATATATATTATAAAGCATTTAATATATAATATATATACTATTGAACTTGATCACTTCAAATAATAAAATAAAAACTTAATAAATATATGTAAATAAGTGTATACACTGTTTCTTCCAGTCAAGGTCCAGGATTCTGGCAATAATGGGGCAAAAGCTTGACGAAAGGATGCAGAAAATAAAAGAAGGCTGTAAAGGACTGGAAGAAGAGGATCTTCTTGCCTCAGTTGCAAGAAATACTAACATAACAAGAGACCAGATTCTTGATTTGATGATCAGCATGCTTTTTGCTGGTCATGAAACTTCTTCTGCCGCCATTTCTCTTGCCATTTATTTCCTTCAAGCTTCCCCTGATGTTCTTAAAAAGCTTCGAGTATGCTTTCCTATCGAATTTTACACTATTAATATGTTATTTGTGACTGGTAATTCAGTTTGGTAATGAAATTATGTAGGAGGAGCACATAAAGATTGCAAAACAAAAGAAAGAAAGGAGCGAAACTGGATTGAATTGGGATGATTACAAGCAAATGGAATTCACAAACTGCGTAAGCTAGCTAGCTTTCATATATTTAAAGCATATATATAAAAGATTATGCCATGGGAAAAATGACTGTAATCGGTATATATATATATATTGTGTAGGTAATTCATGAAACCCTAAGATTAGGCAACATCGTTAAGTTTTTGCATCGGAAAACCATCAAAGATGTTCAATACAAAGGTAAATTCAGTAGCTTGTTTATGTTGTTAATTTATAGCAGTGTCAAAAACATAAGGTTTGAAATGCTATCTTTACAGGTTATGAAATTCCATGTGGTTGGGAAGTAGTGCCGATCATCTCAGCAGCACATTTGGATTCTTCTATCTTTGACAACCCACAAAGCTATGATCCTTCGAGGTGGGAGGTAAGTTACAAGTACTTATTTGCTATATGCTTCTTCTGTCATTGACAAACATATACATATATACATATATGTATGTATGTATGTATGTATGTGTGTATATATGTATACACTCTTATGCTTAGTGTTAAAAACATAAAATCCATTGTGTAGGCGATATTTTCAGCAGGAGCAAAGAGCAATATAATGTCATTCAGCGGTGGACCTCGGTTATGTCCAGGAGCAGAGTTGGCGAAACTGGAGATGGCTATTTTTCTTCATCATCTTGTACAGAGGTTCGACTGGGAATTGGTGGAGAAGGATAACCCTGTATCATTCCCCTTCCTTGGATTTCCCAAGAAATTGCCTATCAAAATCACAGCTCTTAAACATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256267.1	3.8e-222	cytochrome P450 90B1-like
Swissprot	O64989.2	6.8e-152	Steroid 22-alpha-hydroxylase
trEMBL	A0A8B7C2L1	1.2e-206	cytochrome P450 90B1-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G50660.1	53.31	7e-157	550	AtDWF4;CLM;CYP90B1;DWF4;PSC1;SAV1;SNP2	Cytochrome P450 superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01610	AT3G50660.1	484	194	3	26	478	30	512	53.31	7e-157	550
AfisC3G01610	AT5G05690.1	441	258	7	35	473	31	463	39.23	1e-90	330
AfisC3G01610	AT1G12740.1	471	304	5	5	475	5	467	33.76	3e-82	302

Ortholog group

Species	Genes
Allium cepa	g136027.t1
Allium fistulosum	AfisC3G01610
Allium sativum	Asa2G00166.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	37	461	213.6	4e-63

Gene Ontology

Accession	Ontology	Name
GO:0016020	C	membrane
GO:0005783	C	endoplasmic reticulum
GO:0005506	F	iron ion binding
GO:0055114	P	oxidation-reduction process
GO:0009647	P	skotomorphogenesis
GO:0009826	P	unidimensional cell growth
GO:0009911	P	positive regulation of flower development
GO:0010224	P	response to UV-B
GO:0010268	P	brassinosteroid homeostasis
GO:0010584	P	pollen exine formation
GO:0016125	P	sterol metabolic process
GO:0016132	P	brassinosteroid biosynthetic process
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0020037	F	heme binding
GO:0044237	P	cellular metabolic process
GO:0048366	P	leaf development
GO:0048441	P	petal development
GO:0048657	P	anther wall tapetum cell differentiation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09587	CYP90B1, DWF4; steroid 22-alpha-hydroxylase	EC:1.14.13.-	Brassinosteroid biosynthesis	ko00905

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network