result

Gene information

Detail information of AfisC3G01627

Location

Gene	Chr	Start	End	Strand
AfisC3G01627	chr3	287388090	287388643	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020276350.1	9.0e-40	auxin-induced protein 22D-like
Swissprot	P32294.1	1.3e-35	Indole-3-acetic acid-induced protein ARG4
trEMBL	A0A5P1EGJ7	6.5e-40	Auxin-responsive protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G43700.1	50.89	2e-36	148	ATAUX2-11;IAA4	AUX/IAA transcriptional regulator family protein

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Ortholog group

Species	Genes
Allium cepa	g320742.t1
Allium fistulosum	AfisC3G01627
Allium sativum	Asa2G01514.1; Asa2G01523.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02309.13	AUX_IAA	Family	43	156	128.8	2.6e-37

Gene Ontology

Accession	Ontology	Name
GO:0005739	C	mitochondrion
GO:0005634	C	nucleus
GO:0005794	C	Golgi apparatus
GO:0006351	P	transcription, DNA-templated
GO:0006417	P	regulation of translation
GO:0006626	P	protein targeting to mitochondrion
GO:0046983	F	protein dimerization activity
GO:0009507	C	chloroplast
GO:0009733	P	response to auxin
GO:0044212	F	transcription regulatory region DNA binding
GO:0016791	F	phosphatase activity
GO:0031967	C	organelle envelope
GO:0044763	P	single-organism cellular process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14484	IAA; auxin-responsive protein IAA	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network