result

Gene information

Detail information of AfisC3G01633

Location

Gene	Chr	Start	End	Strand
AfisC3G01633	chr3	287871864	287874090	-

Sequences

CDS

>AfisC3G01633
ATGATCAATAAAACCAAACGCCAAGACAACATCCTCCTAGGGAAATACGAGCTCGGTCGCCTCCTCGGCCGAGGCACATTCGCCAAGGTATACCATGCCAGATCCATGTCGGAGAACACCTCCGTCGCCATCAAAGTCCTCGACAAACCCGAAATCGTCAGCACCGGCGTCGCCCCCTTGATCCTCCGCGAGGTCTCCGCCATGCGCAGCCTCTCCGACCATCCCAACATCCTCAAGCTCCACGAAGTCATGGCCACCAAATCCAAAATCTACCTCGTCATGGAGCACGCCAAAGGCGGCGAACTCTTCTCCCGCCTCGCCTGCCGCGGCCGCCTCCCTGAACCGGCCGCCCGCAGGTACTTTCAGCAGCTAATCTCCGCCTTGCAATTCTGCCACGCCCACGGTATAACGCACCGCGACGTGAAACCTGAGAATCTCCTTCTTGATCGCGACGGAAATCTGAAGCTCGCCGATTTCGGCCTGTCGGCTTTGCCGGACCAGCTTCGTACGGACGGATTGTTGCATACGGCTTGTGGTACTCCGGCTTACACCGCTCCTGAAGTCATCAGACGAGCTGGTTATGATGGAGCCAAAGCCGATGCTTGGTCTTGCGGTGTAATTCTTTTCGTTCTCCTTGCAGGTTTTCTTCCATTCAACGACTCTAACATCGTAACAATGTACAAGAAAATACAAAAGAGGGACTATCAGTTCCCACCATGGTTCTCACCATCAGCCAAACGGGTGGTGTACAAGCTTTTGGACCCAAACCCGAAGACCCGGCTAACAATTGAAGGGGTGATGGACCTGCCCTGGCTAAGAAGAGCCTACAGTGTAGATAAAAATCTAGATTTATTAGACTACTTGCCACAAACATTCAAAGAAGCAAACGGCGAAAACTCATTAATGTCCGCACCATCGATGAACGCATTCGATATCATATCGCTTTCTTCTGGACTGGACTTATCAGGAATGTTCAATGATACGAAAAGGAAGGAGAGGAGGTTTACATCGACTTCGAGCATGGAGAACATTCTAGAAAGGGTGGAGGAAGTTGGGGCGAAATATGGGTACGTGGTGGAGAAGAGAAAATGTGGGGTGGTGGGGAGAGGAAAATGGGGGTCGGTGTTGTCGGTGGAGGTGTCGATGATGGCGAAGGAGGTGATATTGGTGGATGTGAAGGTGGTGGGTGGTGGTGAAGGGATTAGTTTGAGTGAGTTGAGGAGTGAGTTAGGGGACTTGGTCTTTTCGTGGCACAATGAGGAGGTGTAG

Protein

Gene

>AfisC3G01633
AAAGAAATCAAGAGCCACCAAAGAAGTTTAAAGAAATAGAAATAAAAATAAAAAGCATGATCAATAAAACCAAACGCCAAGACAACATCCTCCTAGGGAAATACGAGCTCGGTCGCCTCCTCGGCCGAGGCACATTCGCCAAGGTATACCATGCCAGATCCATGTCGGAGAACACCTCCGTCGCCATCAAAGTCCTCGACAAACCCGAAATCGTCAGCACCGGCGTCGCCCCCTTGATCCTCCGCGAGGTCTCCGCCATGCGCAGCCTCTCCGACCATCCCAACATCCTCAAGCTCCACGAAGTCATGGCCACCAAATCCAAAATCTACCTCGTCATGGAGCACGCCAAAGGCGGCGAACTCTTCTCCCGCCTCGCCTGCCGCGGCCGCCTCCCTGAACCGGCCGCCCGCAGGTACTGCTACTGCTTTACCCCCCCACTAATCGAGCAGTTTCGGTGAAACAGAGTTTTCAGATCGGGATGTTAATATGGTAATTTCGAACAAATATTGCAGGTACTTTCAGCAGCTAATCTCCGCCTTGCAATTCTGCCACGCCCACGGTATAACGCACCGCGACGTGAAACCTGAGAATCTCCTTCTTGATCGCGACGGAAATCTGAAGCTCGCCGATTTCGGCCTGTCGGCTTTGCCGGACCAGCTTCGTACGGACGGATTGTTGCATACGGCTTGTGGTACTCCGGCTTACACCGCTCCTGAAGTCATCAGACGAGCTGGTTATGATGGAGCCAAAGCCGATGCTTGGTCTTGCGGTGTAATTCTTTTCGTTCTCCTTGCAGGTAATTATTCATTTAGCTCCTCTCTCCTTTTCTTGTTCGTTTTCCTTTACCTTTTCTTTTTACTTTTTTTTTAACACAAAAGAATTTGGTGGTGTTTGTTGTGATTTGATCAATGAACAACTGAGCGTAGATTTGTACTTTTGTAATTAAAAATGGGACTTGTATTGTTACGACTAGCTAATGCATCTTGAAAAACAATCTGGTTTTCTTCCATTTTTGTAATTATAGCTTATTTTGTAATGTATATCCTGATAAACAATGCATTTGCACTGTTTTTTTTACTCACCATACATTATTTGGTAAGATATTTATTCTTCCGAGATGGCGATTTTTGTGCAAGTTGAAACTGATGTAATTATGAATGAACAGGTTTTCTTCCATTCAACGACTCTAACATCGTAACAATGTACAAGAAAATACAAAAGAGGGACTATCAGTTCCCACCATGGTTCTCACCATCAGCCAAACGGGTGGTGTACAAGCTTTTGGACCCAAACCCGAAGACCCGGCTAACAATTGAAGGGGTGATGGACCTGCCCTGGCTAAGAAGAGCCTACAGTGTAGATAAAAATCTAGATTTATTAGACTACTTGCCACAAACATTCAAAGAAGCAAACGGCGAAAACTCATTAATGTCCGCACCATCGATGAACGCATTCGATATCATATCGCTTTCTTCTGGACTGGACTTATCAGGAATGTTCAATGATACGAAAAGGAAGGAGAGGAGGTTTACATCGACTTCGAGCATGGAGAACATTCTAGAAAGGGTGGAGGAAGTTGGGGCGAAATATGGGTACGTGGTGGAGAAGAGAAAATGTGGGGTGGTGGGGAGAGGAAAATGGGGGTCGGTGTTGTCGGTGGAGGTGTCGATGATGGCGAAGGAGGTGATATTGGTGGATGTGAAGGTGGTGGGTGGTGGTGAAGGGATTAGTTTGAGTGAGTTGAGGAGTGAGTTAGGGGACTTGGTCTTTTCGTGGCACAATGAGGAGGTGTAGTTAGCAATGATGATGGTTATGTATATTGTTAGGGTGTGGGTAAATGACTAATTTTGGATCAAGGGGGGAGAATATTGTACACAGGATGAATGTAGTTTGCTTTTGGTTTTGTTTAATTTTGATATATGTGTTCATGTAGCCTTTGTTCTAAGTTGGCTTTTGGTTGCTTGATCTTTTTGATGGAGCATGTGCACTGAATCATTTTGTGTTAGGTGGTGGAATTGTCAAATCTGATTCTACTTTTGGAGCGAACAAAATATGTTGTTAGGGTTTGGGGGACTGCATTTGGGAGAATATTGTACGCAAGATGGTTGTAGTTTGCTTTTGGTGTTTAATTTTGATGTGCATTCAGTGTACTTTTGTTTGTTCAGGCTTGTTGCATGTTTGGTTTGATTATTTGATATGCCAGGTGCATAAAATATCTTGAGTTTTG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010936028.1	2.2e-157	CBL-interacting protein kinase 7
Swissprot	Q9SUL7.1	4.9e-130	SOS2-like protein kinase PKS9
trEMBL	A0A6I9S1H4	1.6e-157	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G14580.1	57.42	5e-129	457	CIPK4;SnRK3.3	CBL-interacting protein kinase 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01633	AT4G14580.1	418	164	4	10	419	15	426	57.42	5e-129	457
AfisC3G01633	AT3G23000.1	417	161	5	11	420	20	427	57.55	3e-125	445
AfisC3G01633	AT5G01810.2	428	196	7	6	418	2	421	48.83	4e-114	408

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	16	272	228.1	1.1e-67
PF03822.11	NAF	Domain	306	361	69.9	1.4e-19

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0001077	F	transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0003729	F	mRNA binding
GO:0042742	P	defense response to bacterium
GO:0050832	P	defense response to fungus
GO:0005739	C	mitochondrion
GO:0005773	C	vacuole
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005986	P	sucrose biosynthetic process
GO:0006979	P	response to oxidative stress
GO:0009268	P	response to pH
GO:0009409	P	response to cold
GO:0009414	P	response to water deprivation
GO:0009506	C	plasmodesma
GO:0009507	C	chloroplast
GO:0009737	P	response to abscisic acid
GO:0010150	P	leaf senescence
GO:0010325	P	raffinose family oligosaccharide biosynthetic process
GO:0010540	P	basipetal auxin transport
GO:0016607	C	nuclear speck
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0019593	P	mannitol biosynthetic process
GO:0035061	C	interchromatin granule
GO:0042538	P	hyperosmotic salinity response
GO:0043565	F	sequence-specific DNA binding
GO:0045944	P	positive regulation of transcription from RNA polymerase II promoter

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Bacterial secretion system	ko03070
K11912	ppkA; serine/threonine-protein kinase PpkA	EC:2.7.11.1	Biofilm formation - Pseudomonas aeruginosa	ko02025

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network