result

Gene information

Detail information of AfisC3G01905

Location

Gene	Chr	Start	End	Strand
AfisC3G01905	chr3	333056531	333056977	+

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	KAE8660124.1	4.2e-31	Cyclin-dependent kinase C-1
Swissprot	Q9ZVM9.1	2.4e-31	Probable serine/threonine-protein kinase At1g54610
trEMBL	A0A6A2XZ69	3.0e-31	Cyclin-dependent kinase C-1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G54610.1	60.16	5e-34	139		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G01905	AT1G54610.3	123	40	2	10	132	104	217	60.16	5e-34	139
AfisC3G01905	AT1G54610.1	123	40	2	10	132	104	217	60.16	5e-34	139
AfisC3G01905	AT1G54610.2	123	40	2	10	132	104	217	60.16	5e-34	139

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	24	108	31.9	7.4e-08

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0000086	P	G2/M transition of mitotic cell cycle
GO:0000307	C	cyclin-dependent protein kinase holoenzyme complex
GO:0002088	P	lens development in camera-type eye
GO:0005829	C	cytosol
GO:0004693	F	cyclin-dependent protein serine/threonine kinase activity
GO:0005524	F	ATP binding
GO:0005694	C	chromosome
GO:0005768	C	endosome
GO:0005813	C	centrosome
GO:0005875	C	microtubule associated complex
GO:0006977	P	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0007099	P	centriole replication
GO:0007259	P	JAK-STAT cascade
GO:0007265	P	Ras protein signal transduction
GO:0008284	P	positive regulation of cell proliferation
GO:0008356	P	asymmetric cell division
GO:0042493	P	response to drug
GO:0009636	P	response to toxic substance
GO:0009409	P	response to cold
GO:0009555	P	pollen development
GO:0009793	P	embryo development ending in seed dormancy
GO:0010005	C	cortical microtubule, transverse to long axis
GO:0010235	P	guard mother cell cytokinesis
GO:0010444	P	guard mother cell differentiation
GO:0015030	C	Cajal body
GO:0018105	P	peptidyl-serine phosphorylation
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0046686	P	response to cadmium ion
GO:0030332	F	cyclin binding
GO:0030496	C	midbody
GO:0031100	P	organ regeneration
GO:0032355	P	response to estradiol
GO:0032403	F	protein complex binding
GO:0032869	P	cellular response to insulin stimulus
GO:0035173	F	histone kinase activity
GO:0040020	P	regulation of meiotic nuclear division
GO:0042023	P	DNA endoreduplication
GO:0045471	P	response to ethanol
GO:0051436	P	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051591	P	response to cAMP
GO:0051602	P	response to electrical stimulus
GO:0060968	P	regulation of gene silencing
GO:0071732	P	cellular response to nitric oxide
GO:0098725	P	symmetric cell division
GO:1901796	P	regulation of signal transduction by p53 class mediator
GO:2000112	P	regulation of cellular macromolecule biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network