result

Gene information

Detail information of AfisC3G02109

Location

Gene	Chr	Start	End	Strand
AfisC3G02109	chr3	365157429	365159363	-

Sequences

CDS

Protein

Gene

>AfisC3G02109
ACAATTAACAAACTTAATTAATATTCCTTTCACTAATTTTTCTTACTTTTACTCATCACACTATTGTAACTTCCAGTTCTCAAAAGAATACAAAAGAAAGAACGCACAAACTCTCCATTATTTTATACTTCTTCTCTTCACCTCTCAGTTTTCTTCTTTCCTCAATCAAACGATTGAAATTAAAAAATCTGTGAATAGAAGGAGATGACTTCAGGAAGTGGAAGAATGCCAACATGGAAAGAAAGAGAGAACAATAAGAGAAGAGAAAGAAGAAGAAGAGCAATCGCTGCTAAGATCTTCACTGGTTTAAGAACGCTTGGTAATTACAAGCTTCCAAAACACTGTGATAACAACGAAGTCTTGAAAGCAGTTGCTGCTGAAGCCGGTTGGATTGTTGAAGAAGATGGTACTACTTACCGTAGGGTAATCTTCTTTATTTTTCCTTCTAATTAATATCTTCTTGGGCCTTTGTTTCTTAGGTATTGATTCGCTTTGATTGACATGGTAGATCCTTATTGTTTTATAATTTCTTTGGTTTTCTGCTTTCATGGAGTAGATCTGCCTTTTTTTTTAATCAATGCGGTTTTTGGATTTAATTTTTTGTTGGGTTTTTGTTCGAAGATTTCTATTTTTAATTCATGCATGGTATTGCTTTTTGAATCCATCTAGATGCCTTCACAACAATGTTGTTAAGTAAATTTTGTTGTAGAAACTTGTAAGTCATTATAATCTAGATTGGAAAGTTTCAGGTCAAGGGAAAAAGCAAAACATTGCTTTAGCATATGATTCTCTTTTGACCAGGGTTACTTTAGTGCAAGTCTCTGTCTAAATTTGCTCTCATTGCACGAGAAAAGCGAAGCGATTATAATGTGAAAATGTATCTCTTTTAATGTTAACTTTCTACCAACTGTTGTTTTCCATTTTGATTCTTTTCATTCAAAGTGTTCGTAGCTTTTCCTTTTCTTTTTTCCTTCGTTGCTTTCGTGTGACTTTGTTTTGAAAAACAACTATCGATTTCTACCATTATGGTTCTATAATGTAGCCGTGTGTATATGACAGGGATGCAAGCCGCCCGCAGAAGAAAACGTCAACAACAACATCACTATGGGCGGCCCATCGACAAACATAAGCCCAATGTCCTCAGCGTATCCAAGTCCGGTCCCTTCGTACCATGCAAGCCCGTCTTCTTCTTCCTTTCCAAGCCCGACCCGCCTTGAGAACCCTAACCCTAACCCTAACCCTAATGTCCCTCCGTCATACCTCCTCCCTTTCCTTCGCAACTTCGCCCTCCCACCACTTCGCATTTCCAACTCCGCCCCCGTTACTCCGCCTCTCTCCTCTCCGACATCTTCCCGTCCTCAAAAGCTGAAGAAACCGAATTGGGAACACGCAATCGGGTACTATCCGCACCCGCTTTTCAATGCATCGGCCCCGTCGAGCCCGACCCGAGGTCGGCGCCAGTTTTTGCCAGCGACGATTCCGGAATGCAACGAGTCGGACGCTTCCACGGTGCACTCCGGGAGGTGGGGAAGTTCACAAACGACTACGGCCCCCGCCTCCCCTACGTTCAACCTCGTCAACCGTCTTGCTTCGTCTATGATTGTGGAAACGGGTGTGGGAACGGGAAGAGGGACGGTTTCGGAATTTGAGTTTGATAAGGGGATGGTGAATGCTTGGGAAGGGGAGACGATGATTGAAGTTGGGGTCGATGATGATCTTGACCTTACTTTGGGCTTGGCTACTACTACTGGTGCTGCCAAGTGAGAGATGTTATCATCGTATCGGTGAATTCCCATTTTTAATAAATTATTATTCGGTATTATTGGTTTTGAGGTTAAATGAGGTGAACGGTGTTTATCCATCTATATGTGTAAATGTTCAAAGAACGAACTGCAGTCTAGTTTTTTGTTTTTGTCCTAGTTCCAATTAATCAGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008795632.1	1.3e-82	protein BZR1 homolog 1
Swissprot	B8B7S5.1	5.3e-73	Protein BZR1 homolog 1
trEMBL	A0A8B7CBI6	9.3e-83	Protein BZR1 homolog

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G75080.1	52.32	3e-64	241	BZR1	Brassinosteroid signalling positive regulator (BZR1) family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G02109	AT1G75080.2	323	120	8	7	304	23	336	52.32	3e-64	241
AfisC3G02109	AT1G75080.1	323	120	8	7	304	23	336	52.32	3e-64	241
AfisC3G02109	AT1G19350.3	318	119	8	7	298	44	351	51.26	3e-61	231

Ortholog group

Species	Genes
Allium cepa	g270903.t1
Allium fistulosum	AfisC3G02109
Allium sativum	Asa2G01763.1
Arabidopsis thaliana	AT3G50750.1
Oryza sativa	LOC_Os07g39220.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF05687.10	BES1_N	Family	4	148	199.5	3.3e-59

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001046	F	core promoter sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005773	C	vacuole
GO:0005829	C	cytosol
GO:0005634	C	nucleus
GO:0009742	P	brassinosteroid mediated signaling pathway
GO:0016161	F	beta-amylase activity
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0048316	P	seed development
GO:0048481	P	plant ovule development
GO:0048831	P	regulation of shoot system development
GO:1904961	P	quiescent center organization

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14503	BZR1_2; brassinosteroid resistant 1/2	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network