Detail information of AfisC3G02283


Location
GeneChrStartEndStrand
AfisC3G02283chr3398786882398807709+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020113025.14.1e-82NAC domain-containing protein 53-like
SwissprotQ84K00.23.6e-59Protein NTM1-like 11
trEMBLA0A199VWN72.9e-82NAC domain-containing protein 53-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G04410.165.913e-68 256anac078;NAC2NAC domain containing protein 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag307554.t1
Allium fistulosumAfisC3G02283
Allium sativumAsa2G01845.1
Arabidopsis thalianaAT3G10490.1; AT3G10490.2
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02365.12NAMFamily1414088.14.8e-25

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005730Cnucleolus
GO:0005789Cendoplasmic reticulum membrane
GO:0008283Pcell proliferation
GO:0009416Presponse to light stimulus
GO:0009555Ppollen development
GO:0009651Presponse to salt stress
GO:0009723Presponse to ethylene
GO:0009737Presponse to abscisic acid
GO:0009814Pdefense response, incompatible interaction
GO:0010014Pmeristem initiation
GO:0010029Pregulation of seed germination
GO:0010199Porgan boundary specification between lateral organs and the meristem
GO:0010200Presponse to chitin
GO:0010228Pvegetative to reproductive phase transition of meristem
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0042803Fprotein homodimerization activity
GO:0043068Ppositive regulation of programmed cell death
GO:0043621Fprotein self-association
GO:0046982Fprotein heterodimerization activity
GO:0048527Plateral root development
GO:0048759Pxylem vessel member cell differentiation
GO:0051091Ppositive regulation of sequence-specific DNA binding transcription factor activity
GO:0070301Pcellular response to hydrogen peroxide
GO:0070417Pcellular response to cold
GO:0071365Pcellular response to auxin stimulus
GO:0090400Pstress-induced premature senescence
GO:0090602Psieve element enucleation
GO:1900057Ppositive regulation of leaf senescence
GO:1900103Ppositive regulation of endoplasmic reticulum unfolded protein response
GO:1901348Ppositive regulation of secondary cell wall biogenesis
GO:1902074Presponse to salt
GO:1903648Ppositive regulation of chlorophyll catabolic process
GO:1904250Ppositive regulation of age-related resistance
GO:1990110Pcallus formation

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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