result

Gene information

Detail information of AfisC3G02578


Location
GeneChrStartEndStrand
AfisC3G02578chr3451991296452030166-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010914582.34.4e-235LOW QUALITY PROTEIN: dual specificity protein kinase shkD-like
SwissprotQ9C9U5.19.6e-94Protein SUGAR INSENSITIVE 8
trEMBLA0A6I9QUT33.2e-235LOW QUALITY PROTEIN: dual specificity protein kinase shkD-like

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G49470.352.640.0 769PAS domain-containing protein tyrosine kinase family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag276731.t1
Allium fistulosumAfisC3G02578
Allium sativumAsa2G02070.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF13426.4PAS_9Domain9219050.41.9e-13
PF07714.14Pkinase_TyrDomain440691229.43.9e-68

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0000165PMAPK cascade
GO:0000166Fnucleotide binding
GO:0005515Fprotein binding
GO:0001666Presponse to hypoxia
GO:0002229Pdefense response to oomycetes
GO:0005829Ccytosol
GO:0004709FMAP kinase kinase kinase activity
GO:0004712Fprotein serine/threonine/tyrosine kinase activity
GO:0005730Cnucleolus
GO:0005769Cearly endosome
GO:0005789Cendoplasmic reticulum membrane
GO:0005802Ctrans-Golgi network
GO:0008219Pcell death
GO:0009414Presponse to water deprivation
GO:0009651Presponse to salt stress
GO:0009658Pchloroplast organization
GO:0009686Pgibberellin biosynthetic process
GO:0009744Presponse to sucrose
GO:0009750Presponse to fructose
GO:0009788Pnegative regulation of abscisic acid-activated signaling pathway
GO:0010105Pnegative regulation of ethylene-activated signaling pathway
GO:0010182Psugar mediated signaling pathway
GO:0012510Ctrans-Golgi network transport vesicle membrane
GO:0043168Fanion binding
GO:0046777Pprotein autophosphorylation
GO:0048510Pregulation of timing of transition from vegetative to reproductive phase
GO:0071281Pcellular response to iron ion
GO:1900150Pregulation of defense response to fungus
GO:1900424Pregulation of defense response to bacterium
GO:2000031Pregulation of salicylic acid mediated signaling pathway
GO:2000035Pregulation of stem cell division
GO:2000069Pregulation of post-embryonic root development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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