result

Gene information

Detail information of AfisC3G02879

Location

Gene	Chr	Start	End	Strand
AfisC3G02879	chr3	511720512	511724163	+

Sequences

CDS

Protein

Gene

>AfisC3G02879
GGTTTCTGCTTCCCCAATTTCTTCTTCAGGAATATTTATTTTCTTTCAGAAGGTAAGTATGGCAATTGATTGTTTGTCGGATTTCGCTCAAACTCAAATCGATCATCGCCCTGGGAAGCGGCCAAGATGGGACGTCGATCCTTTGGTAATTTTTTAACCAATTCCTTGATAAATATGTAGATTTACCCAATTTTTGCAATTCTTTATTTCCCTAACAAATTTACGTCGTATTTGTATTGGATTCATGATCACCAATAAATTAACGATATATCTATGAAAGTTTTTTGGTCCCGGGTTTTTTTTTTGACTTTTTAGTTGTTGAAAGATCCTTATGTCAGATCGGGTAAGGGTATTCTCGTTACAATCAAATTGATGGTAATATTTTGGAGATTCATGAAATAGATCCCCGATGTATTGTTCTGTATACGAATTAGATATCTGGTTCCCCTAGTTTAATCCGCTAATAATATAAACCAAATGATTTGATCATATAGCTTTGCTGATGTATAAATCTTGGTTTTGTATGGTTCTGTTATGGTTGGTATGCATCAGAGCTTACACTCAAGTTGACTAGACGATTTTAAATGCACTCTTTTTGTGCATCAATGTATTTGATCATAAGCAAAAAAAAGCTGTTTGTTATTATATATGTGCGCTTTCAAATAACCGTCAAACTTCATATTCATTTAGTTTTGGACCAAATATAGCTAACTATCCCTTTGTATGGAAAATAAATAAATTGTTTTTTGTAGACTCAGGTTGGATTGTTACGCAAGAAAGAAGATAGTCTTCGAGACTTGACAAACTTGGAATCATCGATTTCACCTTTAAATGATAGCAAAATGACTGAAATTACCTACACTCATAAGATAAGGGATGATAAGGATGGTCACTATATGTTTAAGATTGGAGATGATTTTACCCCTCGCTGTAATTACTTTATTCATTTGCATGTGTACAAGTATTTGTCAAATTTTTTTGATAGCAAATCATGACCTTCAATTTCTGTGTTTACGTACTTGCAGATAAGATCTACCGCAAAATGGGGGAAGGTTAGTCTCATGCCTGTTATCAAAAGATGAGTAAGTTTGTAGAAGTTTCGCTCACTGTATATTTTGATTTATGCACCAGGCACTTTTGGTCAAGTATTGGAGTGTTGGGACAGGGAGAGTAAAGAAATGGTAGCAATTAAGATTGTTCGAGCTGTGGATAAATATCGCGAGGATGCTATGATTGAGATTGATGTGCTTCAACAGCTTAAGAAGCACAATAAATCTGCTGGCCGGTCAGTACCTTTTATGAATTATTTGTTTGCTTAGTTTTATTATTACTCTGTATGCGTTAAGACGTATCTTCAAGTTGCTAATTTTTGCAGTTGTGTGCAAATAAGGAACTGGTTTGACTATTGTAATCATATTTGTATTGTAAGTACATAACTGATTCAGAATGAATTACCATACTAACAACTGAAAATGAATGTTAAGTCTTTGGTACATTAATTGGCATCAACAGGTATTTGAGAAGCTGGGGCCAAGTTTGTATGATTTTCTAAAGAAAAATGATTATCATCCATTTCCTATTGACTTAGTGCGTGAGCTTGGCAGACAACTATTGGAATCACTAGCATGTGTGTAAACAGTACTTTTAAGATAAACTCTTTACTGCATCTAGTGTCCATTGTGTTTTCTTCCTTATGTTTTGTCTAATTCCAATATAAAGTAGGTCTGCTTGGCAGCTACCTGCTAATTTTTAGGTTAAAAAATACAGAATATTAACGCCGAAGCTTTTTTAAACTTCTATTGTTCTTATTTTTTAAATGCTATTTATTCAAAATTTAAAGTTAAAAAACATATTTTTCTTTATAAATTATTCTAGAAAGCTTTGAACCTTTTGTACTTGAATTTTATAATACGACTCAGTATTGGACATTTGTTAATACCATAACTTAGACTAGATGTTAGATATCAGTTTGCATGTTTGAATTCTTCAGTATCAGCATATTTGCGTTTACCTTGTACATGTGCATGCATGCAACTAAGCCTCTGATGCTCACACTTTGTTAACAGTAATTTTTTGTTCTCCCTCTACCGTCTTGCAGTTATGCATGATATGAATCTTATTCATACTGATCTGAAGCCTGAAAACATTCTTTTCGTTTCTCCCGAGTACATTAAAGTATCAGACCATAAGGTACCATGTTGAATGGGTCATATATATTACACTAACCAATTGGACATGCAGGACAATTATCTCATTTAACTTTAATAACTTACTGTTGAGCCATGATATCCCTTAATTAACATTTAAAATTTTTATTTTACTGATTGTATGGTTATTTATAGTTTAATAAGGCTGGATCCTCCTCTTTAAGATTACCAAAATCTAGTGCTATCAAGATAATAGATTTTGGCAGCACAACAAATGATAGCCAAGATCATAGTTATACTGTATCAACAAGGCATTATCGTGCTCCTGAGGTTATTTTGGGTAGGAGATTGGTGTTATTTATTTTACATATATACCTTGTTCACCTCCTCTAAATAATGTCATGTTCCAAGGTAATCTCTGTACTTAAATAACAATTAGTTCAAATTTGTTCATCATTATCAGGATTGGGATGGAGTTATCCCTGTGATATCTGGAGTGTTGGTTGCATTCTTGTAGAGCTGTGCACAGTAAGCGTTGATTTGAAAGCATTTTTATGGTCTGTTCATTTGCTTTTTGAGGCAGCTGATATCTGAAATTAATGCCAATAGGGAGATGCACTGTTTCAAACCCATGAAAATTTAGAGCACTTGGCAATGATGGAAAGAGTGTTAGGTCCTATACCCCAGCATTTGTTGAGGAAAGCTGAGTAAGTGTCATGTTTATGATTGTGGTAGCATTGATTTTAATATTCATTTTAGTTCATTTTCTAATTAGTGGGTTTGAAATATTTCAGCCGACATGCTGAAAAATATTTTAGGAGGGGTCGTTTGAGCTGGCCTGATGGTGCCTCTTCAAGAGATGCCATCAAAGCTGTTTCTAAATTGTCTCGTCTTGAGGTACATAAGTTTGTTATATAAAAGCTCAAAAATATGTGCTATAGAACATATTGGTTGCAATTAAAGATATTATCCTTTTCTTATCATCTTTACTTGCATGCAGAGTATCATACTACGGAATGTAGATCGTTCGGCGGGTGATCTAATAGATCTTTTAGAGGGCTTACTAGATTATGAACCATCGAAGCGGTTGACTGCCCATGAAGCACTCAAGCATCCATTCTTCACAAGGAGTAGTCGTTCAAGGTCTTAGCTTATGTTCTTGCTGCTAAATTGTGATTGGACAGCAATATTGAAGTTCTTTGTGCTCGATCAATCATCATTGGGTGCTTCCAGTGTGGTGATGTGTGCTGCTCAGAAGATGAGTAGGCCGTGCTTTCGAGATATCACTTGTATAGCAGATACATGATTTATTGTGCTTTTTATTTGATAGCCCCAGCAGTTGCGCTGTTTTGCTTTATCTAGGTTGTAAATGAATAAACAGTAGGTATTTTGTACAATGCAATCAATTTTTTTGCTTTTATTAACGGTCCTAACCTTTGTGTGTTTTGTGTTCACTTTATGTTCTGGTCGTGTTTCATGGAATATATATCACATTTAGTGTGAGC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_021631221.1	4.9e-59	serine/threonine-protein kinase AFC2-like isoform X2
Swissprot	P51567.1	5.8e-57	Serine/threonine-protein kinase AFC2
trEMBL	A0A2C9UT07	3.5e-59	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G24740.2	70.59	4e-59	223	AFC2;AME1;FC2	FUS3-complementing gene 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G02879	AT4G24740.2	136	40	0	11	146	187	322	70.59	4e-59	223
AfisC3G02879	AT4G24740.1	136	40	0	11	146	290	425	70.59	6e-59	222
AfisC3G02879	AT3G53570.4	137	41	1	12	147	310	446	69.34	2e-56	214

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	17	144	54.8	7.9e-15

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0004325	F	ferrochelatase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004712	F	protein serine/threonine/tyrosine kinase activity
GO:0004715	F	non-membrane spanning protein tyrosine kinase activity
GO:0005524	F	ATP binding
GO:0005654	C	nucleoplasm
GO:0006397	P	mRNA processing
GO:0006783	P	heme biosynthetic process
GO:0006955	P	immune response
GO:0006979	P	response to oxidative stress
GO:0007275	P	multicellular organism development
GO:0008283	P	cell proliferation
GO:0009535	C	chloroplast thylakoid membrane
GO:0051707	P	response to other organism
GO:0010212	P	response to ionizing radiation
GO:0018108	P	peptidyl-tyrosine phosphorylation
GO:0070887	P	cellular response to chemical stimulus
GO:0031969	C	chloroplast membrane
GO:0043484	P	regulation of RNA splicing
GO:0044822	F	poly(A) RNA binding
GO:0045111	C	intermediate filament cytoskeleton
GO:0046777	P	protein autophosphorylation
GO:0048519	P	negative regulation of biological process
GO:1901700	P	response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network