Detail information of AfisC3G03000


Location
GeneChrStartEndStrand
AfisC3G03000chr3531146173531162955+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010241901.18.4e-249PREDICTED: beta-amylase 2, chloroplastic-like
SwissprotO80831.26.7e-227Beta-amylase 4
trEMBLA0A835RXZ51.1e-250Beta-amylase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G45880.161.300.0 806BAM7;BMY4beta-amylase 7

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Ortholog group
SpeciesGenes
Allium cepag526851.t1
Allium fistulosumAfisC3G03000
Allium sativumAsa2G02377.1
Arabidopsis thalianaAT2G45880.1
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF05687.10BES1_NFamily53165123.21e-35
PF01373.14Glyco_hydro_14Domain223640332.72.7e-99

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005829Ccytosol
GO:0005634Cnucleus
GO:0005983Pstarch catabolic process
GO:0042802Fidentical protein binding
GO:0009414Presponse to water deprivation
GO:0009507Cchloroplast
GO:0009934Pregulation of meristem structural organization
GO:0010075Pregulation of meristem growth
GO:0010480Pmicrosporocyte differentiation
GO:0016161Fbeta-amylase activity
GO:0033612Freceptor serine/threonine kinase binding
GO:0043167Fion binding
GO:0043621Fprotein self-association
GO:0048229Pgametophyte development
GO:0048831Pregulation of shoot system development
GO:0080027Presponse to herbivore

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K01177E3.2.1.2; beta-amylaseEC:3.2.1.2 Starch and sucrose metabolismko00500

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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