result

Gene information

Detail information of AfisC3G03053

Location

Gene	Chr	Start	End	Strand
AfisC3G03053	chr3	538829190	538829861	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	AUY62741.1	4.3e-26	AP2/ERF transcription factor
Swissprot	O80337.2	1.9e-26	Ethylene-responsive element-binding factor 1A
trEMBL	A0A3Q8D532	3.1e-26	AP2/ERF transcription factor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G47220.1	63.73	6e-29	122	ATERF-2;ATERF2;ERF2	ethylene responsive element binding factor 2

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Ortholog group

Species	Genes
Allium cepa	g188643.t1
Allium fistulosum	AfisC3G03053
Allium sativum	Asa2G02375.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	51	101	52.3	4.5e-14

Gene Ontology

Accession	Ontology	Name
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0001944	P	vasculature development
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0009414	P	response to water deprivation
GO:0009789	P	positive regulation of abscisic acid-activated signaling pathway
GO:0009835	P	fruit ripening
GO:0009864	P	induced systemic resistance, jasmonic acid mediated signaling pathway
GO:0009873	P	ethylene-activated signaling pathway
GO:0010186	P	positive regulation of cellular defense response
GO:0010200	P	response to chitin
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019760	P	glucosinolate metabolic process
GO:0051301	P	cell division
GO:0090332	P	stomatal closure
GO:1904277	P	negative regulation of wax biosynthetic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network