result

Gene information

Detail information of AfisC3G03054

Location

Gene	Chr	Start	End	Strand
AfisC3G03054	chr3	538958771	538962444	-

Sequences

CDS

>AfisC3G03054
ATGGATAAGTCTTTCGAATTCAGTACTACTAAAGAGGATCTGAAGGTTGAAGACTGTTCATTCATTATAGAGAAGTCTGATAAAATTGAAATCCCTAATTCAGTAAAGTTACAAAAGGGGGAAAATTCAATTGGAAGAGATGATGATTCTAGTATCAATAGCATAGATTCATGCAATGAAGGTTCAACTTCATTCTCCGGCGTAAGTCATCCATTGGAACCAATTGATTCAGATCTCATGAGCTCCATAATAACATTATCTCTTAAGGATGGACCATTTATAGAAGAACATTCGATCAATATCCCAAGTGTTGAAACCGCATTGGAAAGTAATGAATCAAAAAACGTTAGTTTGGAAGAAAGGGAATGTGTTTGGGATGCTTCCTTGCCTCCTAGTGGCAATGTAAGTCCTCTAAATAGCATTGATGCCTCAATTGTAGGAACTACTATAAGCTTCGCTCATGCACAACTTAAAGCATGCACTACTTGTAATATTGCAAAAGATAATGCTATAAGCAAGTCACTTGAAAGCAGAAAGACAAGTGTCGATAGTGCAACTTGCATAAAAGCATACAAAAATAGCGAAAGTGCAAAAGAGAGCGCTATTGGTGACTCATTAGGTAGTACGAAGACCAGCATTAGTCGAGCAAGTGATAGTAGCATTGTTAGTGATGATAGCAGTTGGAGTAGTAGCGTGATTGGAAGTTCAAATAGGCCACATAAAGGAAATGACCCTAGGTGGAAAGCTATTATGGCTATTAAGGGTCGAGATGGAAATTTGGGCATGGGGCATTTTAGATTGCTTAGAAAGCTTGGTTGTGGAGATATTGGTAGTGTATATTTGTCGGAGTTAAGTGGAACAAAGTGTTATTTTGCCATGAAAGTTATGGATAAAACATCGTTGGCTAGCAGGAAGAAGTTGGCTAGAGCTCAAACGGAGAGGGATATACTGAAAATCTTGGATCATCCATTTTTACCGACTTTATATACTAATTTCGAGACTGATAGATTTACGTGCTTGGTTATGGAGTATTGCCCAGGCGGCGACTTGCATACTTTGAGGCAGCGACAACCTGGAAAGCATTTTTCTGAATATGCTGCCAGGTTTTACGTTGCGGAAATCCTCCTAGCCTTGGAATACCTTCACATGCTCGGAATAGTCTATCGAGACCTGAAGCCAGAAAACGTCCTAGTTAGGCAGGACGGCCACATCATGCTCTCAGACTTTGACCTCTCCCTCCGCTGCTCCGTTTCACCTACCCTGCTCAGAACCCTAGACTCCTCCGACCCAACAAAAGCCCTATGCATAAACCCTAGCTCCTCCTGTCTCCAGCCGTCGTGCTTCTTCCCACGCCTCTTCCCTCACAAGTCCAAGAAAAGCAGAAATGCCTCCAAGTTCTCTCAAAACCATGAACTCGTGGCGGAGCCCACGTCCGCGAGGTCCATGTCCTTCGTAGGGACTCACGAGTACCTCGCCCCTGAGATAATTAAAGGGGAAGGCCATGGCAGTGCGGTTGATTGGTGGACTTTTGGAATATTCCTTTATGAGCTCGTGTATGGAAAGACTCCTTTCAAAGGAGCAGGGAACAGGGCGACCTTGTTCAACGTGGTGGGTCAACAGCTCAGATTTCCAGAAGGAGGTCCTTCGGTCAGTCACAGCTGTCGCGATCTGATTCGTGGACTTCTGACGAAGGAGCCACAGCATAGGTTGGGGGTGAAGAGAGGGGCTACGGAGATAAAGCAACATCCATTTTTCGAAGAGGTGAACTGGGCGCTCATTAGGTGCAGTACACCACCTGTGGTGCCGAGGTGTCAGATGGAGGTTGAGGTGGAGAAGAGAGTTGAGGGTACCCTTAGTAAAAGGATGGTTAAGAGTGAAGCGGAGAGTGGAGGCAAGTTTCTTGATTTCGAGTTTTTCTGA

Protein

Gene

>AfisC3G03054
AGAGCACATCACTAGCAAAACCCAAGGAACAAACAAAAACAAAGACTGCAGTCGCTGCTGTTTTCTTCTTTTTCTCTTTACTCTTTTTCAGAGTAGAAGACTCAGAAATATTCCCACAACAATCTTTCTTCAGTATAATTCTTGTCTTCTGTTCATATTCTTCAATCTTAGCTCGCATTTGCCGACATTTTTCTCGGAGGTACGAACTTTGCATTTCCTTCCTTTGCTGTACTTAATTTTTCTCTTTGTTTAAAAACTGGATTTGCGTTAATTTCACTATTGTTTGATTTCTTTCCATGTCAATTTATGATACATTTAATCTATTTTCTCTCAAATTCATGCAATATTGTACTGTATTGATTCAGTATTTATTGAATGTGAATGTTAAGTGTTAGTACTTACTTCTTTCCCCTTTTTGGTTTACGCAGGTTTGGGAAGTAAGATTTCGCTCATAACAGACATTATTGACCAATCGGTGACATAATTCTGAAATTTTAAGTTTTATTGAGGTACAAATTGAGATTTTGTTGTAATTTTTAGTTCAAGTGGGGAATGCTACCAAACCCTAACATAAGCCATGGATAAGTCTTTCGAATTCAGTACTACTAAAGAGGATCTGAAGGTTGAAGACTGTTCATTCATTATAGAGAAGTCTGATAAAATTGAAATCCCTAATTCAGTAAAGTTACAAAAGGGGGAAAATTCAATTGGAAGAGATGATGATTCTAGTATCAATAGCATAGATTCATGCAATGAAGGTTCAACTTCATTCTCCGGCGTAAGTCATCCATTGGAACCAATTGATTCAGATCTCATGAGCTCCATAATAACATTATCTCTTAAGGATGGACCATTTATAGAAGAACATTCGATCAATATCCCAAGTGTTGAAACCGCATTGGAAAGTAATGAATCAAAAAACGTTAGTTTGGAAGAAAGGGAATGTGTTTGGGATGCTTCCTTGCCTCCTAGTGGCAATGTAAGTCCTCTAAATAGCATTGATGCCTCAATTGTAGGAACTACTATAAGCTTCGCTCATGCACAACTTAAAGCATGCACTACTTGTAATATTGCAAAAGATAATGCTATAAGCAAGTCACTTGAAAGCAGAAAGACAAGTGTCGATAGTGCAACTTGCATAAAAGCATACAAAAATAGCGAAAGTGCAAAAGAGAGCGCTATTGGTGACTCATTAGGTAGTACGAAGACCAGCATTAGTCGAGCAAGTGATAGTAGCATTGTTAGTGATGATAGCAGTTGGAGTAGTAGCGTGATTGGAAGTTCAAATAGGCCACATAAAGGAAATGACCCTAGGTGGAAAGCTATTATGGCTATTAAGGGTCGAGATGGAAATTTGGGCATGGGGCATTTTAGATTGCTTAGAAAGCTTGGTTGTGGAGATATTGGTAGTGTATATTTGTCGGAGTTAAGTGGAACAAAGTGTTATTTTGCCATGAAAGTTATGGATAAAACATCGTTGGCTAGCAGGAAGAAGTTGGCTAGAGCTCAAACGGAGAGGGATATACTGAAAATCTTGGATCATCCATTTTTACCGACTTTATATACTAATTTCGAGACTGATAGATTTACGTGCTTGGTTATGGAGTATTGCCCAGGCGGCGACTTGCATACTTTGAGGCAGCGACAACCTGGAAAGCATTTTTCTGAATATGCTGCCAGGTACTTTTCCGGTTTTTCTTTACAGTTATGGTTGCTATATCTGAAGTGTGTTAAATTTGTTTAAAATTTACTGTTGCAACTCATTAATTCATATATTTGGAATCACAGTATTCCCTGTTGGGGTCATAATTTTTTCCTAACTACACACCATCTCTAAACTTTGATAAACCACCCAAAATAATTATAGCAACCGCATTGTAGCAATACATCTATACAGAATCATATTCTTACACAGCCTTCTGCTAACAATGTAGTCAGATTCTTATCTATGGGTCACTATAGTGTAAAACATAATTTGCTGTTAAACTATTGCTTGGTCAAATTTAACTTTACCATTTTGGAGAAACCATATATTAATAATATCAACTTCCTCTAGCATTCATATAAATGTATTGATGCCGCACTTTTTTTTTCCTAGTGGACTTAGTTAAATGTACTGCTGTTCTCTTCATAAGTGGTTTTGAGTCTAAACACGACAAACATTATCATTTTCCACAAAGTATGATATCGACACTATAGAGTACATGGATTTGGCTCAAATCAATCAATGTATTTTAGCATATTTACTATGTCAAGTAACATACATTTTAATCAGATTATTACTCTCTTTGAATCACTGTAATATAGGAAATTTTTACTCTTAAACTATTGCTTCTTGACATTTTGCTTTACCTTCATGCAACCTTATTGATTACATCAACACCATCTAACATTCACACTCCTGCATCGACGTTACATGCTTTTTTTCTTCTTCCATAATGGGTGTAGTAGAGTCTACCGTTGTTTATTCATAAGTGGTTTTGAATCCAAACGCAACAAACATGATCATTTACCATAAAATTATTATTTCAACACTGTTATAGAGATTATATAATGGTTCAGATGAATCAGTGCATATTAGCATATTTATCATGTCAAATAACAAACTCTTCCATCAAATTACCAGGTTTTACGTTGCGGAAATCCTCCTAGCCTTGGAATACCTTCACATGCTCGGAATAGTCTATCGAGACCTGAAGCCAGAAAACGTCCTAGTTAGGCAGGACGGCCACATCATGCTCTCAGACTTTGACCTCTCCCTCCGCTGCTCCGTTTCACCTACCCTGCTCAGAACCCTAGACTCCTCCGACCCAACAAAAGCCCTATGCATAAACCCTAGCTCCTCCTGTCTCCAGCCGTCGTGCTTCTTCCCACGCCTCTTCCCTCACAAGTCCAAGAAAAGCAGAAATGCCTCCAAGTTCTCTCAAAACCATGAACTCGTGGCGGAGCCCACGTCCGCGAGGTCCATGTCCTTCGTAGGGACTCACGAGTACCTCGCCCCTGAGATAATTAAAGGGGAAGGCCATGGCAGTGCGGTTGATTGGTGGACTTTTGGAATATTCCTTTATGAGCTCGTGTATGGAAAGACTCCTTTCAAAGGAGCAGGGAACAGGGCGACCTTGTTCAACGTGGTGGGTCAACAGCTCAGATTTCCAGAAGGAGGTCCTTCGGTCAGTCACAGCTGTCGCGATCTGATTCGTGGACTTCTGACGAAGGAGCCACAGCATAGGTTGGGGGTGAAGAGAGGGGCTACGGAGATAAAGCAACATCCATTTTTCGAAGAGGTGAACTGGGCGCTCATTAGGTGCAGTACACCACCTGTGGTGCCGAGGTGTCAGATGGAGGTTGAGGTGGAGAAGAGAGTTGAGGGTACCCTTAGTAAAAGGATGGTTAAGAGTGAAGCGGAGAGTGGAGGCAAGTTTCTTGATTTCGAGTTTTTCTGATGTACTTTATATTCATGCCTTTTGTTGTGTTATGGCTGCAATGTGTTGGTGATTGCTCCTCTTATTGTACAGAAGATGGATTGAATAGTTTGTCAGTAAGACGAGAAGATCTAGTGTAGTGTTTTCTGATTCTTGTTAAAATTCAGAACTTATGTAATTTAGCAATGTGTTGGTCATTGCAACTATTATACTGATCATGGATGGATTAAATAGATTGTTAGCGAGACAAGC

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020241393.1	2.9e-201	serine/threonine-protein kinase D6PK-like
Swissprot	Q0DCT8.1	1.8e-160	Protein kinase G11A
trEMBL	A0A5N5HGT0	8.1e-198	Serine/threonine-protein kinase D6PK-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G44830.1	57.31	0.0	711		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G03054	AT2G44830.1	670	186	17	47	639	119	765	57.31	0.0	711
AfisC3G03054	AT5G47750.1	473	121	10	192	639	119	586	68.08	2e-177	619
AfisC3G03054	AT4G26610.1	446	135	9	208	639	68	506	65.02	8e-166	580

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	266	417	128.3	3e-37
PF00069.22	Pkinase	Domain	481	585	75.6	3.6e-21

Gene Ontology

Accession	Ontology	Name
GO:0000155	F	phosphorelay sensor kinase activity
GO:0000160	P	phosphorelay signal transduction system
GO:0004674	F	protein serine/threonine kinase activity
GO:0005198	F	structural molecule activity
GO:0005524	F	ATP binding
GO:0005730	C	nucleolus
GO:0005874	C	microtubule
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006468	P	protein phosphorylation
GO:0007018	P	microtubule-based movement
GO:0008728	F	GTP diphosphokinase activity
GO:0008893	F	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity
GO:0009507	C	chloroplast
GO:0009734	P	auxin-activated signaling pathway
GO:0009860	P	pollen tube growth
GO:0009882	F	blue light photoreceptor activity
GO:0009908	P	flower development
GO:0009925	C	basal plasma membrane
GO:0009958	P	positive gravitropism
GO:0009986	C	cell surface
GO:0010150	P	leaf senescence
GO:0010540	P	basipetal auxin transport
GO:0015970	P	guanosine tetraphosphate biosynthetic process
GO:0015979	P	photosynthesis
GO:0019901	F	protein kinase binding
GO:0042594	P	response to starvation
GO:0048766	P	root hair initiation
GO:0048767	P	root hair elongation
GO:0048825	P	cotyledon development
GO:0080167	P	response to karrikin
GO:1901981	F	phosphatidylinositol phosphate binding
GO:2000114	P	regulation of establishment of cell polarity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08286	E2.7.11.-; protein-serine/threonine kinase	EC:2.7.11.-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network