Detail information of AfisC3G03128


Location
GeneChrStartEndStrand
AfisC3G03128chr3556010290556039792+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020276823.13.0e-87growth-regulating factor 4-like
SwissprotQ6ZIK5.17.1e-57Transcription activator GRF4
trEMBLA0A067EAQ23.8e-71Growth-regulating factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G37740.154.359e-37 151AtGRF2;GRF2growth-regulating factor 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag362206.t1; g519934.t1
Allium fistulosumAfisC3G03128
Allium sativumAsa2G02477.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF08880.8QLQDomain53851.74.7e-14
PF08879.7WRCDomain6710969.51.3e-19

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005739Cmitochondrion
GO:0005829Ccytosol
GO:0005524FATP binding
GO:0005618Ccell wall
GO:0005635Cnuclear envelope
GO:0005774Cvacuolar membrane
GO:0005794CGolgi apparatus
GO:0006355Pregulation of transcription, DNA-templated
GO:0006995Pcellular response to nitrogen starvation
GO:0008285Pnegative regulation of cell proliferation
GO:0009506Cplasmodesma
GO:0009570Cchloroplast stroma
GO:0009624Presponse to nematode
GO:0009631Pcold acclimation
GO:0009739Presponse to gibberellin
GO:0009742Pbrassinosteroid mediated signaling pathway
GO:0044212Ftranscription regulatory region DNA binding
GO:0016036Pcellular response to phosphate starvation
GO:0050826Presponse to freezing
GO:0019760Pglucosinolate metabolic process
GO:0046686Presponse to cadmium ion
GO:0019904Fprotein domain specific binding
GO:0030912Presponse to deep water
GO:0043565Fsequence-specific DNA binding
GO:0045309Fprotein phosphorylated amino acid binding
GO:0048046Capoplast
GO:0048364Proot development
GO:0048366Pleaf development
GO:0051365Pcellular response to potassium ion starvation
GO:0061062Pregulation of nematode larval development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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