Detail information of AfisC3G03256


Location
GeneChrStartEndStrand
AfisC3G03256chr3579836388579854830-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020257693.13.7e-68homeobox protein HOX1A-like
SwissprotP46605.11.8e-64Homeobox protein HOX1A
trEMBLA0A5P1FBW12.7e-68Homeobox protein HOX1A

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G19510.143.441e-59 228HAT3.1Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag411818.t1
Allium fistulosumAfisC3G03256
Allium sativumAsa2G02088.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00628.26PHDDomain35741237.11.9e-09
PF00046.26HomeoboxDomain59363941.01.1e-10

Gene Ontology
AccessionOntologyName
GO:0003677FDNA binding
GO:0046872Fmetal ion binding
GO:0006355Pregulation of transcription, DNA-templated

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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