result

Gene information

Detail information of AfisC3G03323

Location

Gene	Chr	Start	End	Strand
AfisC3G03323	chr3	593815454	593816717	+

Sequences

CDS

Protein

Gene

>AfisC3G03323
TTGCAATAATCAGCAACAAATAAAGGGACTTGCACCACACAAAAAGTAAATATCATCTTTGATTTTATTTCTCAGTAAGAAGCTTCATCAAATTTTCATGGATATTTCTCTGTGGTCTACGGTGTGTGCATATAAAATATGATAATAATCTTATCTTAATTAGTATTTCAATTTACGTTCTCTCTTTTTTAATCTGTTCATGTAAAGATAAAGAAGCTTTATCTTCTTTTCATGCCAGAATATCATGATCAAACCAATCTTTATCATACTTACTTTTGTTCTATCGTAATGTCTTTTTGCCAGTTTCATGCCATCAACAAAAGTTATTTCTCTTTCCTATACATGATTAAAGTTTAAAATAATTCATATTTTTTTGTTGTTAAATTCTAAAATTTCGCTTAGTTCTCCTTTTACTCACTGTTACAAAGGTTTATAAGGACCTTTGATTAAGTACCATGTTCATTAGCAACATGAATCAATTCTTAACATGTCCTTATTTATGTCTGTTAGGATTTAAGGTTGATGAAATCAAATGTAAAAGAAGTAGGCAGCAGCAACACCACCTCAAGCAATACAAATTCTTCAGAACCGCAACAATCGTTGAATGAAACAAGAACTACAAAGCCAGCAAAAGGAAAGGCTTTAAACTGCCCTAGATGCAACTCAAAAAACACAAAATTTTGCTACTACAACAACTACAGCCTGACTCAACCAAGATACTTCTGCAAGACATGCAGAAGGTACTGGACTGAAGGTGGGTCTCTCAGAGATGTTCCTATTGGTGGAGGTTCCAGAAAGAACAAGAAATCAACTACAGTATCTCCAGCTTCCACATCCATTTCTTTATCAAATTTGGTTTCTAGTTGTAATACCACTACTTCTACTTCTAAGATTAGTGATAATGTTACTAATCACGACTTGAACTTGGCTTTTTCATTAGTCCAGCCTTCAGACTTTACTAGTACTAGTAGTATTGCTACTCCTTTTATGCCCATAATGATGAGTTCTGTGCCTTCTATGTCGTTTGCAATGCAAGATTTTAGGTCAAATGCACTGAGTTGTCCTTTGGATTTCATTAGTGGAACTGATCATGGTGAGAACAGTGAAGGGAGGCTTCTGTTTCCAATTGAGGAAGTGGGGCGAATGAATTATACAAGTGGAGATGTTAACGGACATGATGATCATTATCAGCAGCAGCAGATTAAATTGCCTGAGCAAAATGGAGGAGATCATCATTATTTTTTGGAATGATTTGTTAAGTGGG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_024439982.1	2.9e-32	dof zinc finger protein DOF3.7 isoform X2
Swissprot	Q43385.2	4.0e-26	Transcription factor BBFa
trEMBL	U5FT89	2.1e-32	Dof-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G61850.1	38.77	3e-31	132	DAG1	Dof-type zinc finger DNA-binding family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G03323	AT3G61850.3	227	99	8	41	234	52	271	38.77	2e-31	132
AfisC3G03323	AT3G61850.2	227	99	8	41	234	52	271	38.77	2e-31	132
AfisC3G03323	AT3G61850.1	227	99	8	41	234	64	283	38.77	3e-31	132

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02701.12	zf-Dof	Family	52	107	113.7	2.9e-33

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0010052	P	guard cell differentiation
GO:0010118	P	stomatal movement
GO:0010200	P	response to chitin
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0048364	P	root development
GO:1902066	P	regulation of cell wall pectin metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network