result

Gene information

Detail information of AfisC3G03413

Location

Gene	Chr	Start	End	Strand
AfisC3G03413	chr3	612174831	612180241	+

Sequences

CDS

>AfisC3G03413
ATGGATGTCCTCCTTTCACTGTTAACCATCGTTACACTTTTCATCTCTCTCCACCTTCTCAGAAAACTGCTCTCACCAAAACTACCACCCGGCCCAACTCCTTACCCTATAGTGGGCAACCTTTACCAAATAAAACCGCTCCGGTTCAGGTGCTTCGCTGAATGGTCCCAGAAGTACGGTCCCATCATGTCCGTCTGGTTCGGCACTACCTTAAACGTGATAGTGTCTAGCTCAGAACTGGCCAAGGAGGTACTCAGAAAAAATGATCACGTTCTTAGCAACAGGCCTAGGAACAGAGCTACGGCACGGTTCAGTAGGGATGGGATGGACCTGGTTTGGGCTGACTACGGCCCCCACTATGTTAAGGTTAGGAAGCTCTGTAATTTGGAGCTTTTTTCCACTAAAAGGTTGGAAGCGTTGAGGCCTGTTAGAGAGGAGGAAGTTACTGCTATGGTTGAATCTATCTTTAAAAGTTGCACTACACCAGAAGGTAGGGTCAATGGAAATAGCTTGGTTCTTAGAAACCATCTCTCATGCGTCGCATTCAACAACATAACGAGACTAGCATTCGGAAAGAGATTCATGAACCCAGACGAAGTTATGGACAGACAAGGTTTGGAATTTAAAGCGGTAGGTTTAGAAGGAATGAAATTTAGTGCATCAATCTCACTAGGAGAATACGTAAGTTGGCTTGAATGGATGTTCCCTTTGGACGAAGCAGCATTTGCAAAGCATTCCGCTCGAAGAGATCAGCTGACTAGAGACATAATGAACGAACACACAATCGCCCGTAATAAAAATGGCGCCAGACAACACTTTGTCGATGCATTGCTCACCCTTCAAGAAAAGTACGACCTCAGCGAACATACCATCATCGGCCTTCTATGGGATATGATAACAGCTGGAATGGACACCACAGTTATCGCTGTGGAATGGGCTATGGCAGAGATAGTAAAAAATCCAAGAGTACAACAGAAGGTGCAAGAAGAGCTTGATAGAGCGATAGGAGTAGATCGCATCATGAGTGAAACAGACTTTGCTAAACTTGCTTACCTACACTGCGTTGTGAAAGAAGCACTCAGACTGCATCCTCCTACTCCACTGATGATCCCACATAAAGCCTCAGCTAAAACCAAAATAGGAGGTTATGACATTCCTGAAGGTTCAGTAATCCATGTCAACGCATGGGCCATAGCCCGCGACCCCTTGTTGTGGAAGGATCCATTAGAGTTTAGGCCAGAAAGATTTGAGGAAGAAAATATAGATATAAAGGGGAATGATTTCAGGGTGTTGCCATTTGGAGCTGGGCGTAGAGTCTGCCCAGGTGCGCAGTTAGGCATTGTATTGGTAGCATCGATGTTGGGCCATCTGTTGCATCATTTTGAATGGAAGCTTCCGGAAGGGATGAAGGCGGATGAAGTGGACATGGGCGAGGCTCCGGGGTTGGTGACTTTTAAGAGTACCCCGCTTCAGGTTGTTGCGGTGCCAAGGTTGCAGCCGCATTTGTACAAACGTGTGACAACGGCTATATAG

Protein

Gene

>AfisC3G03413
CAAAAGCGTCAATTTATTGCAATTAAAGCCGAGAAAACGTTAGCCGCCCTCCTCTTTCCTCACCACACACTTGCATCAATGGATGTCCTCCTTTCACTGTTAACCATCGTTACACTTTTCATCTCTCTCCACCTTCTCAGAAAACTGCTCTCACCAAAACTACCACCCGGCCCAACTCCTTACCCTATAGTGGGCAACCTTTACCAAATAAAACCGCTCCGGTTCAGGTGCTTCGCTGAATGGTCCCAGAAGTACGGTCCCATCATGTCCGTCTGGTTCGGCACTACCTTAAACGTGATAGTGTCTAGCTCAGAACTGGCCAAGGAGGTACTCAGAAAAAATGATCACGTTCTTAGCAACAGGCCTAGGAACAGAGCTACGGCACGGTTCAGTAGGGATGGGATGGACCTGGTTTGGGCTGACTACGGCCCCCACTATGTTAAGGTTAGGAAGCTCTGTAATTTGGAGCTTTTTTCCACTAAAAGGTTGGAAGCGTTGAGGCCTGTTAGAGAGGAGGAAGTTACTGCTATGGTTGAATCTATCTTTAAAAGTTGCACTACACCAGAAGGTTTTCTTATTTCTTTCTTCTTTACACTCGGTATATAAATTTGAAACGCAGTGAGGCTAAATGCACTAACTTTATGTTTACTATACAATACAAAATTTAGTAACTTTGAGTATAAAATTTGTTTTATATAATACCCTTTTTTTGTTTATTTTTTAACTTGGTAAAAAAACGACGGGCCACGATAAATTTCTATCAAAATTGATCGAAGTTCATATTTAAACCAGCATATGACACCGTACAGTCTAGGACTGCACAAAGTATGGGTTGGGTCGGGTCAGACCAAATATTTCATCCGACCCGCATAGATATGGGTTTAAGGTAGCTCAACCCGTATACGACCCTATATGAGGTTGGATATGGGTTGGGTCGAAGTATGGGTTGGGTCGGATTTAGTAGGGTTGGGTTGCATAAATCTAATAAAAATGAGAATATAAGGGAATATTTTCAAAAAATAACATTAAAATGTTCAACATAATATATTAGATTTTAGATAGCATAACGCACTTAAACTAACTAATTCATTATAACATATATTTTAGTAAAATTTCATTGTAAAACACATCATATGAAATTAGTTCACTACATAGTAGAACAAGTGTTTCATTTTAAAATACATTAAAATGCCCTTTGGAATATCTTTGCCAAATTCTATCTTGTTTGGGTTGACATAAAATATGTTTTTTCGTATATTTACTGTAGAATACATAAACATTATTCTAGGATTAGACTATTCTAATTTTAAGTGTATTGATATTAAATTAGGTTTTTAATATAGGGTTGGGTTGGATTAAAGTAGGGTTGGGTTGAACAAAATAACACAACCGACCCATATATAGTATGAGTTACAAATTGTAACCCATATCCGACCCGAACTAGGATGGGTTGGGTTGGGTTTATGTGGGTTGGGTCGGATTGGATATGGGTTGTCTGCAGCCCTAGTACAGTCTTAACACATAACTTATACGGCATCATACAACCGTAGCATATAAAAGCACGCGACAACATTCAAACGTAGTACACGACAGTACGCGACAATAAATCACAGTTAGATAGAAAAATGATGGAGAATCAACCAGTTTGTTCTACGATTTCCTCTTTTTCTTAATTAATGGGAGACCTCTTACTGCGTTAGGAATAGGAGGTAAGGCGGGTATAGTCAGGATTGGTTTAGGAAAGTAGCTTGCAACCCAAACTAAGGACTTATTTTTGAAGCCCTCTTGGCAAAAAGAATGTTTAATTTAGAAAGAGAAATGACAAAAATTGAATCAGAAATATCATTGATTTCTTAAACATAGTAACATCATCTTTTCTGATACTAAGAAACACGAAAGTGAATTTTTATGGTATTTTTTACATATAGTAACCGAGAGTGTAAATTGAGATGCCCTTGACATCATATTTGAAATATAGTTAGTTCTAACTTTTGAACACCAAAAAGTTAGAATGGTCATCTTGTTAACATAAAAGCAGTTTAGAATAATAATATCTTTATAATAACACACGGGATGAAATAGAGTATTCTGTGGCGTAGAAAACTTGTAGAAAATTGATATAGCACACTTATATTCTTGTTTAGACCATAATTATAGTGATAGTTGGTGAAATCCAAGAATGCAAAACTAATTTGTCTGCAACTAGTCTTTATTTTACATGTATTGGAATATTAATAGATAATAGATACACGATTCCAAAATTCTAAATTGATAGGTAATGTCAAAGACATTCATTATTTTTGAGTTAAGTAGTTGTACTATTATTTTTGCAATAGTATATATAGTTGCCGTAGCACATTTGTTGCCCTTTGCATTTTTCTGCCTTTAATTTTCTTTCCTTTTTCACCAATTATTTTGATAATCTTACCAAACTGAATTCTTCCATTTTGTCTGGATATTTTGGCACCCCTTGTGTATATGTAGTGTTTTCATGATAGAACATAACCGCAACCAATCTCGAATAACCCTGTACCGTACACCACTTTGGACCATAACATAATCGGACCTCAGTCGTGTACAAACCACATGTCGAATCTTCAAATCTTCGGTTTAACCATCCATTTTAATAGATTGAACCTAGATTTTTTTAAAATCTATTTTTATTACTTTCTTACCGTACCATTCTCTTATATTCTTATTATTTGAGGAAAATAAATAAATCCATCGAAAATCATTATCGTTCAAAAATTTGATCATCAAGCCGCTATAAGTTTTTTTAAGGGCACTATAAGTTTTATAAAGCTCGGCATCACTAAATTTCTCTCATTTTGTGCTGCTGCTATTTACACAAATGCAGTTGTTATTGATGTCTTTGTGCATTACATCTATACACAACTTTAATTGCAAACCTTGAAAACTTTCGATTAATTTTAATATTTTGTGTATGATTTGTATTTAAACATGTAAACATTCGAAAATAAAATTCACAATTTGGACGATTTGATAGGTTGAACAAAGTCATCATGGTTCATGAAAAGTGTGATTTTATGTTTTAACTTTTTACTATAATTTTACACTAGCTAGCTGCGATGGCTGATATATAGGCATATGTTAATAAGAAAATATAATCACCAAAAAGCCGGTATAACTGGGGTCCATAGTGCACAACGAAATAAGCACATGATGTCTAGCTCCGAACCTTATCATGGTGCTTAAAGTGCTTGTACGACGTGTGTAAAAGTCTCCTTTGTTGTAAAGCTAACGTAGCCTACATAATAGGATACCAGCACACAGCAAAAGCAGCTTATGTCGCGTTTTTAATTACTATGTAATTGCTTTGCACATAAGGTTCTGTTTTTTTATGTTTTATAAGAAAAGTGAGTATGTAAATTAGGTTTTTATTTTTTTTAAATCAGTAGTAAACGTAAACTAAGTTGTGTTTTCCTAAAAAAAGTGCACCTATCAAAAGTTTCAAAATTTTAAAAAAAATCAAAATAAAAAAACGCAAACTAGGTTGTGCTTTTCTAATAGAAAGCGTAAGTTAATTTGCGCTTTTCAAAAATTTCAAAATTTTCTTAAAAAAAAGTTTCACTATAAAAAAATTGCAAGTTAGTTTGCATTTTTTGTCAAAAAATGGAAAGGTATCTTGCGTTTTCTATTTTTAAAAAATAAAGACAAAATTTATATATTCATTTCTAAAAGCGTTTTTCTTACAACACCATAATAAACAAGGACATGGGAACTTTTCTTGTTTTATATATTAGCCATTTCATGATTAAAAGTGTAGACCACTGCTTTTAAAACACAGTTACTTTATCTTAGACCAGTAACGGTTACCGATTCATATAATTCAGGTAGGGTCAATGGAAATAGCTTGGTTCTTAGAAACCATCTCTCATGCGTCGCATTCAACAACATAACGAGACTAGCATTCGGAAAGAGATTCATGAACCCAGACGAAGTTATGGACAGACAAGGTTTGGAATTTAAAGCGGTAGGTTTAGAAGGAATGAAATTTAGTGCATCAATCTCACTAGGAGAATACGTAAGTTGGCTTGAATGGATGTTCCCTTTGGACGAAGCAGCATTTGCAAAGCATTCCGCTCGAAGAGATCAGCTGACTAGAGACATAATGAACGAACACACAATCGCCCGTAATAAAAATGGCGCCAGACAACACTTTGTCGATGCATTGCTCACCCTTCAAGAAAAGTACGACCTCAGCGAACATACCATCATCGGCCTTCTATGGGTAGTGTACCACTACTACTTCAACCTGATCATTGTTATTAATTATAACTTTGAAATCTCAAATTTTAAATAACTATATGTGTAGGATATGATAACAGCTGGAATGGACACCACAGTTATCGCTGTGGAATGGGCTATGGCAGAGATAGTAAAAAATCCAAGAGTACAACAGAAGGTACTTATTCTTCTTCTTATTCTTCAAATAGTCCCACGTCGTGTAAGTAAGTAACATATGGATTCTGTATAAAAAATGAAGGTGCAAGAAGAGCTTGATAGAGCGATAGGAGTAGATCGCATCATGAGTGAAACAGACTTTGCTAAACTTGCTTACCTACACTGCGTTGTGAAAGAAGCACTCAGACTGCATCCTCCTACTCCACTGATGATCCCACATAAAGCCTCAGCTAAAACCAAAATAGGAGGTTATGACATTCCTGAAGGTTCAGTAATCCATGTCAACGCATGGGCCATAGCCCGCGACCCCTTGTTGTGGAAGGATCCATTAGAGTTTAGGCCAGAAAGATTTGAGGAAGAAAATATAGATATAAAGGGGAATGATTTCAGGGTGTTGCCATTTGGAGCTGGGCGTAGAGTCTGCCCAGGTGCGCAGTTAGGCATTGTATTGGTAGCATCGATGTTGGGCCATCTGTTGCATCATTTTGAATGGAAGCTTCCGGAAGGGATGAAGGCGGATGAAGTGGACATGGGCGAGGCTCCGGGGTTGGTGACTTTTAAGAGTACCCCGCTTCAGGTTGTTGCGGTGCCAAGGTTGCAGCCGCATTTGTACAAACGTGTGACAACGGCTATATAGGTAGAACTGCTCTCGAACCAGTATTGAGCTTAGTATATGAGAATTTATTAAGTGTTGCGAACAATCCAACACATCGTTCTGAAATGTCATTATATAGCAACTTATATAGATGGGCAATGAAGTGAACGTTGGTTATTTCAGTGTAAGACATGGTTTTTTTTTGGATATACAATACTTCTTCCCAGCACTTCAACACAGGCTGTATATTCGTAGACTGTGTTTGCATGTTGATGAAAACTTTGTTGAAAGTGCTTATTGAGTATTAGCATTTCCTCTCAAGAGCTTCACTTTTAGACTCGAACTCGTTGCTCCGTCATGTGGAAATGTTCGCGCATTCCTTCGTTTCAAC

Functional annotation

Database	accession number	e-value	annotation
nr	A0A2H5AIX6.1	1.5e-229	RecName: Full=p-coumarate 3-hydroxylase; AltName: Full=Cytochrome P450 C3H
Swissprot	O48922.1	2.3e-214	Cytochrome P450 98A2
trEMBL	M9T0K9	9.2e-229	p-coumarate 3-hydroxylase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G40890.1	67.26	0.0	733	CYP98A3	cytochrome P450, family 98, subfamily A, polypeptide 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G03413	AT2G40890.1	504	160	4	4	506	5	504	67.26	0.0	733
AfisC3G03413	AT1G74550.1	507	235	9	1	503	1	486	48.72	2e-135	479
AfisC3G03413	AT1G74540.1	492	236	8	4	491	5	480	47.97	3e-128	456

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	29	482	337.0	1.5e-100

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0016021	C	integral component of membrane
GO:0005739	C	mitochondrion
GO:0005783	C	endoplasmic reticulum
GO:0005506	F	iron ion binding
GO:0005794	C	Golgi apparatus
GO:0055114	P	oxidation-reduction process
GO:0006721	P	terpenoid metabolic process
GO:0008216	P	spermidine metabolic process
GO:0008610	P	lipid biosynthetic process
GO:0042802	F	identical protein binding
GO:0009411	P	response to UV
GO:0009733	P	response to auxin
GO:0009805	P	coumarin biosynthetic process
GO:0009809	P	lignin biosynthetic process
GO:0009813	P	flavonoid biosynthetic process
GO:0010584	P	pollen exine formation
GO:0016711	F	flavonoid 3'-monooxygenase activity
GO:0020037	F	heme binding
GO:0042430	P	indole-containing compound metabolic process
GO:0046409	F	p-coumarate 3-hydroxylase activity
GO:0051791	P	medium-chain fatty acid metabolic process
GO:0052582	F	(+)-menthofuran synthase activity
GO:0072547	F	tricoumaroylspermidine meta-hydroxylase activity
GO:0072548	F	dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity
GO:0072549	F	monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity
GO:0072550	F	triferuloylspermidine meta-hydroxylase activity
GO:0072551	F	diferuloyl mono-(hydroxyferuloyl) spermidine meta-hydroxylase activity
GO:0072552	F	monoferuloyl di-(hydroxyferuloyl) spermidine meta-hydroxylase activity

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09754	CYP98A, C3'H; 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase	EC:1.14.14.96	Phenylpropanoid biosynthesis	ko00940
			Stilbenoid, diarylheptanoid and gingerol biosynthesis	ko00945
			Flavonoid biosynthesis	ko00941

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network