result

Gene information

Detail information of AfisC3G03604

Location

Gene	Chr	Start	End	Strand
AfisC3G03604	chr3	643550122	643551166	+

Sequences

CDS

Protein

Gene

>AfisC3G03604
TTAAAAACCATCTTGTCCCTCCCCTTCTAAAAACAAAACAATGTCCGAATTAACCACCTCCGGAAACTACTGCCAGGACCAACTCTCTTCCGACTCATCCTCAACCACCAGTTCATGGGAAGGCCTTGAATTCAACACAAACGACCCCGACGACATGCTCCTCTTCTCCATGCTCACCCAACTCACCAACACCAACACCACTGCTGCTGCTACCGCCGCCACAGTCAAACCCAAAGAAGAATCCGAAGTCGAATCCAACACCAAACCCGAATCCGAACCCAAAAGCTACAGAGGCGTACGCAGGCGTCCATGGGGCAAGTACGCAGCCGAGATCCGCGACTCCACCAGAAACGGAGTCAGAGTTTGGTTAGGAACCTTCGACGATGCCGAAGCTGCTGCTTTAGCTTACGATCAAGCCGCTTTCGCAATGAGAGGCGATTTGGCTGTTTTGAACTTTCCTGCTGATGAAGTCAGGGAGAGTTTGCGTGGAGTTTTGAAGTGTGAAGATGGGTCCCCTGCCATGGCCTTGAAGAAGAAGCATTCCATGAGAAGGAAGTCCTCTTTGGGGGTCAAAAAAGGATCTAGTACTGTGAAAGTAAGAAAAGATGCAAGTGCTGGTGTTGTGGAGTTGGAAGATTTGGGTGTTGAGTATTTGGATGAGCTTTTGAGAACTACTACTACTACTTCTTCTTCTTCCTCCTACATCGATTCTTCCGATTTATTCTAGTCATGGATTGGATACATTTTTGGAGTAGATTTGACACTGTTGATTCAGCACGGGCTTGCTTGGGTGTGTGAACTTTATTCTTATTGGTTGTATATTCGGAATAATTGAATGCATTTGTTTGCTTGGCCCATCAAGCGTACATAGTCCATTACATGAACGCCCAGCGTCAAGCGTTCGCTAAATGGACGTACAGTAGTACTGTGATAAAGTGTAGTTGTAAAATATGTATTGTTAACATTCATTTAGTGAACGTCGGTCCTGTATTGGAGCTGTTGGATCTTCTATTAGCTAATATTTCTGACTATTCAGTTGAATCCT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020248108.1	1.9e-43	ethylene-responsive transcription factor 1B-like
Swissprot	A0A3Q7I5Y9.1	2.4e-38	Ethylene-responsive transcription factor C3
trEMBL	D6MKJ0	2.0e-45	Transcription factor (Fragment)

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G23240.1	53.01	1e-42	169	ATERF1;ERF1	ethylene response factor 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G03604	AT3G23240.1	183	75	6	29	209	36	209	53.01	1e-42	169
AfisC3G03604	AT2G31230.1	163	49	3	79	213	82	243	52.15	3e-37	151
AfisC3G03604	AT1G06160.1	166	45	4	81	213	80	244	52.41	7e-33	137

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00847.17	AP2	Domain	82	132	46.9	2.2e-12

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0001944	P	vasculature development
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0050832	P	defense response to fungus
GO:0005634	C	nucleus
GO:0009409	P	response to cold
GO:0009507	C	chloroplast
GO:0009789	P	positive regulation of abscisic acid-activated signaling pathway
GO:0009861	P	jasmonic acid and ethylene-dependent systemic resistance
GO:0009864	P	induced systemic resistance, jasmonic acid mediated signaling pathway
GO:0009873	P	ethylene-activated signaling pathway
GO:0010186	P	positive regulation of cellular defense response
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding
GO:0051301	P	cell division
GO:0090332	P	stomatal closure

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14516	ERF1; ethylene-responsive transcription factor 1	EC:-	MAPK signaling pathway - plant	ko04016
K14516	ERF1; ethylene-responsive transcription factor 1	EC:-	Plant hormone signal transduction	ko04075
K09286	EREBP; EREBP-like factor	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network