result

Gene information

Detail information of AfisC3G03615

Location

Gene	Chr	Start	End	Strand
AfisC3G03615	chr3	645424430	645428304	-

Sequences

CDS

>AfisC3G03615
ATGTTACTACCTTTGTGCCATGGCTTGCTATTGCTGGTTCTATGTTCATTTTTCTTCCCCTCATTTGCTCTCGAGATTGGCTTTCCACGCTGTAGTTGCTTTGCTGATAACTTTTGGAGCATTGAAGGAATTCTTCAATGGCAAAAAGTTAGTGATTTTTTCATAGCAACAGCATATTTTTCAATTCCATTAGAGCTACTTTACTTTGCTACATGCTCGACCTTATTCCCATTCAAATGGATTGTTATTCAGTTTGGGGCATTCATTGTACTTTGTGGACTTACTCATCTCCTAAATGTCTTCACTTACGAGCCACATTCCTTTATGTTAATGCTAAGCCTCACCATATCAAAGTTTTTCACCGCACTTGTATCATTCGCCACAGCTATAACTCTCCTGACTTTAATTCCTCAGCTTTTGAGAATCAAAGTGAGGGAGAATTTTTTGAGAATAAAAGCAAGGGAATTGGATCGAGAAGTTGGTATGATGAAGATGCAAGAAGAAACACGTTGGCATGTTAGAATGCTTACTCAAGAAATAAGAAAGTCACTGGACAGACATAAAATCTTGTACACTACTTTAGTCGAACTCTCAAAAACTCTAGGTTTAGAAAATTGCGCTGTTTGGATGCCAAGTGAGGATAAGAAAGAGATGAACCTAACTCATGAGCTGCGACAAAAAAGCTCTTCTGATCTGTATGTTCGTTCTATTCCTATTGATGATATAGATGTTCGTGTTATTAAAGAATCACCAGGTGCTATAATATTGAGACCAGATTCACTTCTTGCTTCTGCTAGCAGTGGTGGCTCTACTTTCGAATCAGGACCTGTAGCTGCTATTCGAATGCCAATGCTTAAAGTTTCAAATTTCAAAGGTGGGACACCTGAAGTTGTACAAACTCACTATGCCATTCTAGTATTAGTTTTGCCTGGAAATAATTCCAGGGTTTGGAGCAATCATGAATTGGAGATAGTAGAAGTGGTGGCAGATCAAGTAGCAGTAGCCCTCTCTCATGCTGCGGTGTTAGAAGAATCACAGTTAATGGCAGAAAAATTGGCTGAGCAAAATCGAGCTTTGTTACTCGAGAAGCAAAACGCTTTAATGGCTAGCGAAGCAAGAAATGCTTTTCAGAAGGTGATGAGTCAAGGCATGAGAAGACCTATCCATTCTATAATTGGTATATTATCTATGTTGCAGCAAGATGATATGAACAAAGAACAAAAGCTTATTATAGACACGATGTGTAAAACTGGGTGTGTGGTTTCAACCTTGATTAACGATGTAATGGAAATTTCTATGTCTAATAATGATAGATTAACTTTAGATATGAGAACGTTTAAGCTGCATTCCATGATTAAGGAGGCGGTTAGCGTTTCTAGGTCTCTTTGCGATTGTAGAGGTTTTAGGTTTGAGTTTCAGTGTGAGAAAATTGTGCCTGATAGTGTTTTGGGCGATGAAAAGAGGATATTTCAAGTGATATTACATATGGTAGGAAGTTTATTGAATGGGAGTAATGAAGGAACCATTGCGTTAAAAATTAGTGGTTTTAATGAGGGTGTAGATAAGATGGATCAGGGTTGGGTTCCGTGGAAAGCAAACTTCTCAGATGGGTATATTTGTGTAAAATTTGAGATTTCGATCAAGAGAATGCAGAATGCTAACCCTACTGCATTAGTTCCAGTGTTTAGGCGCCCGAACTCTGAAGGTTTTGATATGGGACTTAGCTTCAACATGTGCAAGAATATTGTGCAGATGATGCAAGGTAATATATGGGCCATACCCAATTCACAAGGTCAACCTGAAACCCTAATTCTGCTACTACAACTCCAGACCCAATTACTGGATCCAATATCCGAACCCAACAGCTCTCTCAACCGCCGCCAAATTTCTTCGTCCACCCCAATATTCAAAAATCTCAGAGTCTTGCTTGCTGACGATGATGTTGTCAATAGAGCCGTGACAAGAAAGCTGCTTGAAAAGTTAGGCTGCCATGTCACCTCTGTCTCTTCGGGTATGCAGTGCTTAAGCTCCATTAGTACATTCGGAACTCCTCAGTTTCAACTCATTGTGTTGGATCTGCACATGGATAAAATGGACGGGTTTGAAGTTGCTGGCATGATCCGCAAAACCAATAGCGGGTCTTGGCCTGCTATCATTGCGTTGACTGCAAGTGCAGAAGATGGTATATGGGAGAGGTGCTTGCAGTCGGGTATGAATGGGTTGATCCGTAAACCCGTTATGCTGCAGACTTTGAGAGATGAGCTTTATAGTGTTTTGCAGAATGCATAA

Protein

Gene

>AfisC3G03615
CTCAATTTGACCTTTTTAAAAAATGCCATGGTAATAAAAAAGCCCAGAAGAAAGAGGAAGAAGATGCGATAAACATCTCAAACGTCTGTAACTTTTACAAAGGCCCCCTTGATAAAACGGCCTTCCGCAGATGTGTCCTCTAAATATCCGATTACTGAAGTTGGCGGTTTTACTGGTATTGGTTTTTATTTTCCCACTTCTGTTTTTGCTTACTTGTTTTGTGGGTTATGTTTGTTGTTAGTATTTGGTTGGTCTGATTAACTTAATATAATCTGAAGAAGCTTTATTCCTTATTAAATAATAGATGAACAGTAGGGGAATGAATGTTAACACTGAAAAGATTAGATTTTGATAAGACGGGATCTGTCCATTTTTCTTGATTTGGATTGGTAGGTATCTTGAATTTTGAATTTTGTTTATTTGTAAGAACTTTGTTAAACTCTTAATCATGTTTTTATCACATAATCAGATCTATTTTTTAATTACTCGTACAAATCATACAACTTTTATTTAATGATGAAAACAATATTCACTCTTATAATTTTTGATTCAGGGCTGATTAGGGTTAGCTGAAGATTGCTAAGCAGGATTATGTTTCCCATATCCAAAAACAATTTTAAATTCATTTGCAAGAGTAGATTGAATGAAGGTGTTTAGAGCAAATGTTACTACCTTTGTGCCATGGCTTGCTATTGCTGGTTCTATGTTCATTTTTCTTCCCCTCATTTGCTCTCGAGATTGGCTTTCCACGCTGTAGTTGCTTTGCTGATAACTTTTGGAGCATTGAAGGAATTCTTCAATGGCAAAAAGTTAGTGATTTTTTCATAGCAACAGCATATTTTTCAATTCCATTAGAGCTACTTTACTTTGCTACATGCTCGACCTTATTCCCATTCAAATGGATTGTTATTCAGTTTGGGGCATTCATTGTACTTTGTGGACTTACTCATCTCCTAAATGTCTTCACTTACGAGCCACATTCCTTTATGTTAATGCTAAGCCTCACCATATCAAAGTTTTTCACCGCACTTGTATCATTCGCCACAGCTATAACTCTCCTGACTTTAATTCCTCAGCTTTTGAGAATCAAAGTGAGGGAGAATTTTTTGAGAATAAAAGCAAGGGAATTGGATCGAGAAGTTGGTATGATGAAGATGCAAGAAGAAACACGTTGGCATGTTAGAATGCTTACTCAAGAAATAAGAAAGTCACTGGACAGACATAAAATCTTGTACACTACTTTAGTCGAACTCTCAAAAACTCTAGGTTTAGAAAATTGCGCTGTTTGGATGCCAAGTGAGGATAAGAAAGAGATGAACCTAACTCATGAGCTGCGACAAAAAAGCTCTTCTGATCTGTATGTTCGTTCTATTCCTATTGATGATATAGATGTTCGTGTTATTAAAGAATCACCAGGTGCTATAATATTGAGACCAGATTCACTTCTTGCTTCTGCTAGCAGTGGTGGCTCTACTTTCGAATCAGGACCTGTAGCTGCTATTCGAATGCCAATGCTTAAAGTTTCAAATTTCAAAGGTGGGACACCTGAAGTTGTACAAACTCACTATGCCATTCTAGTATTAGTTTTGCCTGGAAATAATTCCAGGGTTTGGAGCAATCATGAATTGGAGATAGTAGAAGTGGTGGCAGATCAAGTAGCAGTAGCCCTCTCTCATGCTGCGGTGTTAGAAGAATCACAGTTAATGGCAGAAAAATTGGCTGAGCAAAATCGAGCTTTGTTACTCGAGAAGCAAAACGCTTTAATGGCTAGCGAAGCAAGAAATGCTTTTCAGAAGGTGATGAGTCAAGGCATGAGAAGACCTATCCATTCTATAATTGGTATATTATCTATGTTGCAGCAAGATGATATGAACAAAGAACAAAAGCTTATTATAGACACGATGTGTAAAACTGGGTGTGTGGTTTCAACCTTGATTAACGATGTAATGGAAATTTCTATGTCTAATAATGATAGATTAACTTTAGATATGAGAACGTTTAAGCTGCATTCCATGATTAAGGAGGCGGTTAGCGTTTCTAGGTCTCTTTGCGATTGTAGAGGTTTTAGGTTTGAGTTTCAGTGTGAGAAAATTGTGCCTGATAGTGTTTTGGGCGATGAAAAGAGGATATTTCAAGTGATATTACATATGGTAGGAAGTTTATTGAATGGGAGTAATGAAGGAACCATTGCGTTAAAAATTAGTGGTTTTAATGAGGGTGTAGATAAGATGGATCAGGGTTGGGTTCCGTGGAAAGCAAACTTCTCAGATGGGTATATTTGTGTAAAATTTGAGATTTCGATCAAGAGAATGCAGAATGCTAACCCTACTGCATTAGTTCCAGTGTTTAGGCGCCCGAACTCTGAAGGTTTTGATATGGGACTTAGCTTCAACATGTGCAAGAATATTGTGCAGGTAAAGCCTTCTACTCTTTACTTTGCTAATATATGTATTAAGTGGTATCTTTCTTGGACTAATTTTGTTGTCATTATAAATAGGTCTACAAGTAGTTTATCATAGACTTTGTAGTTTGTTCTTTAAGCAAGCGTGTTATGGCGTTGCCATAGTTAAACTTTAAAGTCATCAGCCCTGTTTTTGCTTCGGCATAAAATGAAATCCATTTCACATGAAACTTTATATATTAACTGATGGTATTTAGCTTCACATGCCTCTTGCTTGCTTTGCAGCTGTTTATATCTATCTGCAAACAACGACTGTATCACATGCTTAGGCTATTTTTGACTACGAGAACAAAAACAAAATGGCTTAAAGCATCCACACACATATACTGATTTGGACGTATAGGCAAAAGAAAGTTATTAAAATGGTTTGTTGTTGGGAAAATGGAGATAGTCAAAGGCTTCATTTGTTTTTAACAGAACAAGTGCTTAATGCTGTTAAGCATTCATTGTAATAAGTCGTTCCTAAATTATCATAAATTAAACATTACGCACTTTGTCAGTGCTTATTGAAATCCTTCATACTTGTTACCTTAAAAAAAAATACTTAACAGACGAAAAATTCTGACTGAAAGCAAACACACGTAACAATAATCAGTATTTATGTTGATTATCATACAGTCAGCCTTATGTTTTGAATTAGTTTTAAATTTACAGATGATGCAAGGTAATATATGGGCCATACCCAATTCACAAGGTCAACCTGAAACCCTAATTCTGCTACTACAACTCCAGACCCAATTACTGGATCCAATATCCGAACCCAACAGCTCTCTCAACCGCCGCCAAATTTCTTCGTCCACCCCAATATTCAAAAATCTCAGAGTCTTGCTTGCTGACGATGATGTTGTCAATAGAGCCGTGACAAGAAAGCTGCTTGAAAAGTTAGGCTGCCATGTCACCTCTGTCTCTTCGGGTATGCAGTGCTTAAGCTCCATTAGTACATTCGGAACTCCTCAGTTTCAACTCATTGTGTTGGATCTGCACATGGATAAAATGGACGGGTTTGAAGTTGCTGGCATGATCCGCAAAACCAATAGCGGGTCTTGGCCTGCTATCATTGCGTTGACTGCAAGTGCAGAAGATGGTATATGGGAGAGGTGCTTGCAGTCGGGTATGAATGGGTTGATCCGTAAACCCGTTATGCTGCAGACTTTGAGAGATGAGCTTTATAGTGTTTTGCAGAATGCATAACAACATTGGATAAGGGCGATGTTTTAATTATTTTATTATGTTTGCCTACTGGGTTTTGATCATTCATTGTTATACATCTCATTGCTTACTCAACTTATTGTATACAACAGAATTTTTTTTGACAGTGAATTTTGATTTAGTTGTATGTTCAGAAATTGTAGTTTATTTTACACATAGCTACGTGGATTGTTATTAATTAAGAATTTTGATAGTGTAAATCTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020261404.1	0.0e+00	ethylene receptor 2-like
Swissprot	Q7XX84.1	1.2e-238	OsPK1
trEMBL	A0A6I9S474	1.8e-292	Ethylene receptor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G04580.1	54.02	0.0	733	EIN4	Signal transduction histidine kinase, hybrid-type, ethylene sensor

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
AfisC3G03615	AT3G04580.2	746	327	9	28	762	24	764	54.02	733
AfisC3G03615	AT3G04580.1	746	327	9	28	762	24	764	54.02	733
AfisC3G03615	AT3G23150.1	776	344	15	9	762	9	769	50.90	713

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01590.23	GAF	Domain	185	336	43.5	3.9e-11
PF02518.23	HATPase_c	Domain	484	599	23.2	7.2e-05
PF00072.21	Response_reg	Domain	641	754	73.2	1.6e-20

Gene Ontology

Accession	Ontology	Name
GO:0000166	F	nucleotide binding
GO:0001944	P	vasculature development
GO:0002237	P	response to molecule of bacterial origin
GO:0042742	P	defense response to bacterium
GO:0005739	C	mitochondrion
GO:0004673	F	protein histidine kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005789	C	endoplasmic reticulum membrane
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006468	P	protein phosphorylation
GO:0042802	F	identical protein binding
GO:0009408	P	response to heat
GO:0009625	P	response to insect
GO:0009651	P	response to salt stress
GO:0009690	P	cytokinin metabolic process
GO:0009727	P	detection of ethylene stimulus
GO:0009733	P	response to auxin
GO:0009737	P	response to abscisic acid
GO:0009739	P	response to gibberellin
GO:0010105	P	negative regulation of ethylene-activated signaling pathway
GO:0010119	P	regulation of stomatal movement
GO:0038199	F	ethylene receptor activity
GO:0043167	F	ion binding
GO:0050665	P	hydrogen peroxide biosynthetic process
GO:0051301	P	cell division
GO:0051740	F	ethylene binding
GO:0052544	P	defense response by callose deposition in cell wall
GO:0071281	P	cellular response to iron ion
GO:1900140	P	regulation of seedling development
GO:2000904	P	regulation of starch metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14509	ETR, ERS; ethylene receptor	EC:2.7.13.-	MAPK signaling pathway - plant	ko04016
K14509	ETR, ERS; ethylene receptor	EC:2.7.13.-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network