result

Gene information

Detail information of AfisC3G03638

Location

Gene	Chr	Start	End	Strand
AfisC3G03638	chr3	650563677	650565783	+

Sequences

CDS

Protein

Gene

>AfisC3G03638
CGCAGAAAACAAAGATAATAGTTGATTATGTTATAGTGTTGTATATACTATAAATAAAGATTTCCCATCACTTCTCTTTCTCCCCCACGTAACAATACACTATAGTTGCAATGACCAGCAACAAATAAAGGGATTTGCACCACATAAAAAATCATCGTTGATTTTCTTTATCAGTAAGAAGCTTCACCAAATTCTCATGGATATTTCTCAGTGGTCTAAGGTATTATGCATATACAATTTGATAATAATCTTAAGTAATATTTTCAGTTCCCGTTCTCTCTTTTTTAATCTGTTCATGTAAAGTTAAAGAAGCTTTATCTTCTTTTCATGGCAGAATCTCATGATCAAAAAAAAAAAATTCTTTATCATACTTACTTTAATTCTATCTTTTATGTCTTTTCACCAGTTTATGTTATCAACAGCAGCTCCTTGTTTTGCCTACCTGATAAAAGTTTTAAAAATTTCCTCTTTGCTTTCTGTTAAATTTCATAATTTCACCTAGTTCTCCTTGTACTCTCAGTTACATAGTTTTTATATGGATTTTTTTTTGAAAACCCAGAAGAACCCGACGGACCGGTAAACTCCTGAGGAGGGTATAATAAAGTCGTCCGCTGATCCAAGCCCCCATATAGGGAAGCGCATGGTAGGAATCGAATCTGGGTCTTTTTACCAGAACTCAAGCCTCATTTCCACTGCGCCGCACCCGCGGACTTTTATAAGGATCTTTGATTAAGTACCGTATTCATTAGCAACATGAATCAATTCTTAACATGTCCTTATGTATGTCTGTTAGGATTTAGGGTTGATGAAATCAAATATGGAGAAAGTAGGCGGCAGCAGCAGCAACACCACCTCAAGCAATACAAATTCTTCGAGATCGCAACAATCATTGAATGAAACAAGAACTACAAAACCAGCAGAACAAAAAGCTTTAAACTGCCCTAGATGCAACTCAACAAACACAAAATTTTGCTACTACAACAACTATAGCCTGACTCAACCAAGATACTTCTGCAAGACATGCAGAAGGTACTGGACTGAAGGCGGGTCTCTCAGAAATGTTCCTATTGGCGGAGGTTCCAGAAAGAACAAGAAATCAAATACAGTATCTCCACCTTCCACATCCATTTCGCTACCAAATATGATTTCTAGCTGCAATACCACCCCTGCTACCTCTAAAAGTAGAGTTAATGATACTAATCATGACTTGAACTTGGCTTTTTCACTAGTACAGCCTCCAGACTTTACTGGTACTAGTAGTATTACTACTCCTTTTATGCCGATAATGATGAATTCCGCACCTTCCATGTTGTTTGGAATGCAAGATTTGAGATCAAATGCATTGAGTTGTCCTTTGGATTTCATTAGTGGAGCTGATCAGGGTGAGAACAGTGAAGGGAGGCTTTTGTTTCCATTTGAGGAAGCGAGGCGAATGAATTATACAAGTGGCCATGTTAATGGAGATGATGATCATTATGAGCAGCAGCAGAATAAGTTGCATGAGCAAAATGGAGGAGGAGATCATCATTATTTTTGGAATGATTTGATTAGTGGGGGTGGTGATTGATTAGGTTAAACTATGAATTTAATTAAGTATGAAAATCACTTATTTTTATATGGTTTTTCTTTGAAAGTAAAATGTTAATTTGCTTAATTCATGCAATTTTAAGTGCCGTTGAACATGTGTGAAGCTTATCTTTTTTAGGTTGGTTTATGTGCTTAAGTTTTGAGTTTGAATGCGTGAGCAGTAGATCTAATGCAATTTGCAATGTCGGAAGTGAAGGAACGGTATCATTTCATTCTTTCTTCTTCTAAAATCAATATTATATATCGTTTCATTTCATTCTTTCTTCTTCTGAAATCAATTTTATACAGCGTTTCATTTTCTTCAAACTATGTATTAGTGCTACCTAGTCTTTTCTTTTGGTCCAGAAAAAAAAAAAAAACTATTTTTTACACCCCTTTTCACAGTTTCGTATTTCGAATGTTTTTTGAATGGTGTCTACAGTTGAAATAGAAATTTCTTTTTTCTTGGTCCTCTATATAAAATTTGTCTTAAAATAGAGCTTTATATCTGGTGGAGAGAAAAAAAAACACAGTGATGTCA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_024439982.1	6.6e-35	dof zinc finger protein DOF3.7 isoform X2
Swissprot	Q43385.2	2.1e-30	Transcription factor BBFa
trEMBL	U5FT89	4.7e-35	Dof-type domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G61850.1	37.65	5e-33	138	DAG1	Dof-type zinc finger DNA-binding family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G03638	AT3G61850.3	255	100	10	43	264	52	280	37.65	5e-33	138
AfisC3G03638	AT3G61850.2	255	100	10	43	264	52	280	37.65	5e-33	138
AfisC3G03638	AT3G61850.1	255	100	10	43	264	64	292	37.65	5e-33	138

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02701.12	zf-Dof	Family	53	109	114.4	1.7e-33

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0046872	F	metal ion binding
GO:0005634	C	nucleus
GO:0010052	P	guard cell differentiation
GO:0010118	P	stomatal movement
GO:0010200	P	response to chitin
GO:0044212	F	transcription regulatory region DNA binding
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0043565	F	sequence-specific DNA binding
GO:0048364	P	root development
GO:1902066	P	regulation of cell wall pectin metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network