result

Gene information

Detail information of AfisC3G03885

Location

Gene	Chr	Start	End	Strand
AfisC3G03885	chr3	694621661	694623320	+

Sequences

CDS

Protein

Gene

>AfisC3G03885
ATGTCTCGATTCGAATTCAAAAGCAAATCTCAAAGCCAAATCAAAATCGGCTCTCGTAAGCAATTCTCAAATTCAGTTGCGGATTCTAGGGGATTCGATGCATTGAATTTGATTTGGGGATTTCAGTCGCTGGTGGGTTGGTCACGTGTAGTTGGTCTCAGTGAATTAGGAACTCGCGATTTGGAAATCGTTGTTGGTGGAGGCGGTGTAGCGGATCCTCTTTATCTATGCTCCTTGATTTGTTATCATGATTGTTTCTTTTGCTGTATCTCATTGTTTTGGTTGAATATAACAGAGTGGAAGTTCTGGAAGAAATGAAATGACATTGACTAAATTTTAAACGATTAGAATTAGATACTGCTTCTCTAAAATGGAGTTTCTTTTATGGACTTTGCTACAGGGCCGTAGGAAGGGGTTGCAGAAATGTATATAATCCAACGGGTGGGGTGGAATTGCAGGCCTTTTAAGCAAATGTATATTAATCTAATCTAATGGAGCTAGTCAATACTCATTTGTTGTTCCTAATTGTGTAGGAAATTTAAAGATAGCTGACTTTGGTCTTAGTGCATTTGCTGGAGCAGATGGTTTGCTCCATACGACATGTGGGACTCCAGCATATGCAGCACCTGAGGTTGCTGAAAAGAAAGGATATGATGGTGCAAAGGCTGATATATGGTCCTGTGGAGTCATCTTGTATGTCTTACTAGCTGGTTCTCTTCCATTTCAGGTATAGTTGCATGCTTGTTAAAAGAAATAAAAGATCCATTGTGTATTTTTATACTGTTCATCATCTTCTTTCAGTAGGATTGTTTTCGCTATTAGTGGAAACTCTGTTAGCTGTTCGTTCCATATTTATAGCAATGGCATAAACCATTGTGTTGTTTATAAAATGGTACTTAGAAAAATATAAGCATAGCTATTGCATTTTCGTCGATTCATTAGTACCACCTAACTTTCATTAATAAATACAAAATCCTCGTTTATTTTTGTTATTTCCTAGATGTTTTGAAATCCCCCTTTGATTTTGGATAAGAAATGGTTGTATATACTAAAGAAATATCATAATTCTACATAGATAAGCTGGAATTCGAAAAAGTTTTTGTTCACCACCTGAGACATTCTCTTTTCCATAGTCAATTCGAAAAATCTTTGAATATACACTATAAAGTTTCTTGCCTCTAAACAAAAACCATGTTCATTTCTGTTATCTATGGTGCTTTTTAGCCTATAGTTGTATTAACTTTCTATTGTGATTTGTACAAAATTGTTTATTTTAAACCTTAAGTTGTTGTACTGTTTCAAAATACATGATGACAATCTTGTGACCATGTACCGAAAAATCCATAAAGGCGACTTCAAATGCCCCTCATGGTTCTCTTCTGATGCTCGTCGCCTAGTCACCAGGCTCCTCGACCCAAACCCGAGAACCCCTATTTCCATTGAAAAAATTATCAATTCTCCATGGTTCAAAAAATCTCTGATGCCGCCACCACTTCCACCAAAGAAAGAAATCGATGATACCCCTGAAATATTCAACGCATTTCATCTAATTTCCCTTTCAAAAGGCTTCAACCTTTCTCCTTTATTCGAAGCCGACTCAAAAGGAGAAGATATAAGGTTTGCAACTAAAGAACCAGCTAGTGGCTTAATATTGTACTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020675333.1	4.9e-66	CBL-interacting protein kinase 6-like
Swissprot	Q6Z9F4.1	5.8e-64	OsCIPK06
trEMBL	A0A835QLF4	2.1e-66	Non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G30960.1	58.94	3e-63	238	ATCIPK6;CIPK6;SIP3;SNRK3.14	SOS3-interacting protein 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G03885	AT4G30960.1	207	57	5	46	232	158	356	58.94	3e-63	238
AfisC3G03885	AT5G45820.1	205	69	6	46	232	146	341	53.17	4e-54	207
AfisC3G03885	AT5G58380.1	228	69	4	47	232	147	365	47.37	1e-50	196

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	46	171	89.3	2.3e-25
PF03822.11	NAF	Domain	190	232	49.7	2.8e-13

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0007275	P	multicellular organism development
GO:0009414	P	response to water deprivation
GO:0009737	P	response to abscisic acid
GO:0010540	P	basipetal auxin transport
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0042538	P	hyperosmotic salinity response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network