result

Gene information

Detail information of AfisC3G04013

Location

Gene	Chr	Start	End	Strand
AfisC3G04013	chr3	718716890	718718636	+

Sequences

CDS

Protein

Gene

>AfisC3G04013
ATGCAACGACAACTAGGCGGTGTCGCGGTGACTCGAATCAAATGTGAATCCAATCAGGTGGCCCATGACTACGGGGACTTGAAGACTTTGGCTAATCAGACGGCAATAGGAAACTCTACAGTGCATAGATCTTCGATTGTTACTGGTTGCTTCCTTGTTAAAAAGGACCAAAAGGTACTTAATTCGTTGAGGGTTTTTGACATTTTTAAAATCCTGAACAAAATTTGATTGTGTAGACAAATTTGAGTGACATTGATCCAGGCAGTCATGTTAGGATTAAGAAGCATGGGAGGTTGAAGGAGCACTATGCTAGAAATTACTTTAGGCAGCTTGTTTCTACTGTTGATTTTTGTCATATCTGTGGAGTTTATCACAGAGATCCGAAACCAGAGAATTTGTTGCTTAATGATCAAGGTAAATTAAGGGTTCAATAGTCTTTAGTGATTTATTCGCAAATTTTGGTCATTTGATTTCAGATCTGCCATTGATTTTCTGCTTGTTAGAGTTGCTTGACATATACATATGTACTACAAGACAGTTGGTAAAATTGTTCCTTTTTTAGATTCATGGTACCTCGCTGTTGAGAAACATACAAAATAAGTAGTGCCCTTAACACATTGTTAAATGATTTTGTTATGTATTCATTGCTAACTAATCAATTATTTTGGTTGAGTTGTGATTGTTGAGAAATATTTTTTTCCTAATTGTATAGGAAATTAAAAGATAGTTGACTTTGGTCTTAGTGCATTTGCTGGAGCAGATGGTTTGCTCCATACGACATGTGGGACTCCAACATATGCAGCACCTGAGGTTGCTGAGAGGAAAGGATATGATGGTGCAAAGGCTGATATATGGTCCTGTGGAGTCATCTTGTATGTCTTACTAACTGGTTCTCTTCCATTTAAGGTATAGTTGCATGCTTGTTAAATGAAATAAAAGATCCATTGTTTATTTTTATACTGTTCATCATCTTCATTCAGTAGGATTGTTTTCACTATTAGTGGAAACTCTGTTAGCTGCTCGTTCCATATTTATAGCAATGGCATAGACCATTGTGTTGTTTATAAAATGGCACTTAGAAAATTATGATCATACATAGCTATTGCATTTCCGTCGATTCATTAGTACTACCTAACTTTCATTAATAAATACAAAAACATTGTTTATTTTTTGTTATTTCCTAAATGTTTTGAAATCCCTCTTTTATTTCGGATAAGAAATGGTTGTGTATACTAAACAATATCATAATTCTACATAGGTAAGCTGGAATTTGAAAAAAAAATTGTTCACCACCGAAAACATTCTCTTTTCCATTGTCAATTCGAAAAAGCTTTGAATAAACACTATAAAGTTTCTTTCCTCTAAACAAAAACCATGTTCATTTCTTTTATCCGTGGTGCTTTTTAGCCTATAGTTGTATTAACTTTCTATCGTGGTTTGCACAAAATTGTCCCTTTTAAACCTTAAATTGATGTACTATTTCAAAATACAGGATGACAATCTTGTGACCATGCACCAAAAAATCCATAAAGGCGACTTCAAATGCCCCTCATGGTTCTCTTCTAATGCTCGTCGCCTAGTCACCATACTCCTTGACCCAAACCCGAAAACCCGTATTTCCGTTGAAAAATTTATCGATTCTCCTTGGGTCAAAAAATCTCCGATGCCACCACCACATCCACCAAAGAAAGAAATCGATGATACGCCTAAAATATTCAATGCATTTCATCTAATTTCCCTTTCATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020675333.1	7.3e-71	CBL-interacting protein kinase 6-like
Swissprot	Q6Z9F4.1	9.6e-68	OsCIPK06
trEMBL	A0A8T3BHB8	5.3e-71	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G30960.1	59.33	3e-68	254	ATCIPK6;CIPK6;SIP3;SNRK3.14	SOS3-interacting protein 3

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04013	AT4G30960.1	209	62	4	76	261	116	324	59.33	3e-68	254
AfisC3G04013	AT5G45820.1	206	76	4	76	259	104	309	52.43	1e-58	223
AfisC3G04013	AT1G30270.1	192	79	3	71	253	119	310	54.17	4e-58	221

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	71	230	129.1	1.7e-37

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005739	C	mitochondrion
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0035556	P	intracellular signal transduction
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0007275	P	multicellular organism development
GO:0007584	P	response to nutrient
GO:0009414	P	response to water deprivation
GO:0009536	C	plastid
GO:0009737	P	response to abscisic acid
GO:0010107	P	potassium ion import
GO:0010118	P	stomatal movement
GO:0010540	P	basipetal auxin transport
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0042538	P	hyperosmotic salinity response

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network