result

Gene information

Detail information of AfisC3G04024

Location

Gene	Chr	Start	End	Strand
AfisC3G04024	chr3	721700020	721701665	-

Sequences

CDS

>AfisC3G04024
ATGAACCTAAGCTACAACCATTTTTTGGGAAGAATACCCATAGAACTTGGCAATCTTGCTTTGTTAGAGTATTTATTGCTCAATAACAATCATTTGAACGGTGAAATTCCTCCAACATTCGGTAATCTATTAAGTTTGCTAGGGCTGAATGTTTCATATAATGATCTCAGTGGACCTCTCCCTTCTATTCCTTTATTTGAGCACATGTCATTAGACAGTTTTAGTGGAAATAAGTATCTATGTGGTGGACCTCTCGGAGAATGCAAACCTCACCCTTCATATCCTTCTCCAACTAAATTAAAAAGAGTACGGACTCGACTTGGCAAGATACTTGCTATAATTTCTGCAGCTATTGGAGGTCTTTCTCTTATTTTTATTGCTGTTATACTGCATTTCTTTAAAAGGTCTACTGAAACAATCGCCCCATTGCAAGAAAATAAGCTTTCTTCGGATTCGGATTTGAATGAATCTTCTAAAGAAGGGTTTGCATATGAAGAATTGGTTTCGGCTACAAGTAATTTTGATGAGAGTCTTGTCATAGGAAGAGGTGCTTGTGGGATTGTGTATAGAGCTACTATGCCTTCTGGCCTTATAATTGCCGTTAAAAAACTGATATCAAATAAAGAAGGGAGCAGTTCTGATAATAGTTTTCATGCAGAAATAGCAACTCTTGGAAAAATTAGGCACCGGAATATTGTGAAGTTGTATGGATTTTGTCATCATGAAGGATCAAATTTACTACTTTACGAGTTCATGCCAAATGGTAGCCTTGGTGAATTGCTTCATAGCAGTTCTAGTGATATTTTAGACTGGAATACACGCTATATGATTGCACTTGGATCAGCTGAAGGCCTTTCGTATTTGCATCATGATTGTCAACCTTGCATAATTCATAGAGATATTAAGTCAAACAATATACTTCTTGATAGTAATTTTGAAGCACACGTTGGAGATTTTGGGTTGGCAAAAGTGATAGATATGCCTCATTCTAAATCGATGTCTGTTGTTGCTGGATCTTATGGATATATAGCACCTGAGTATGCATATACCATGAAGGTCACAGAAAAATGCGATATATATAGCTATGGTGTTGTACTATTAGAGCTACTAACTGGTAAGACGCCTGTTCAGCCTTTAGACAATGGAGGGGACCTGGTTTCATGGGTAAAAAGTTACGTTAACAAATATTCCTTTGGTTCTGGAGTTTTTGATAATCGTGTAACTTTAGGAGAACAAAATGTGGTTGATCATATGATCATGGTATTAAAAATTGCTTTGTTATGTACGAGTACGTCGCCTAGTGATAGACCACCTATGAGACAAGTTGTTGCCATGCTTGTTGAGTCCAAAGTGAAAAGGCAGGAAGCTTCCAGTTATCACTAG

Protein

Gene

>AfisC3G04024
ATGAACCTAAGCTACAACCATTTTTTGGGAAGAATACCCATAGAACTTGGCAATCTTGCTTTGTTAGAGTATTTATTGCTCAATAACAATCATTTGAACGGTGAAATTCCTCCAACATTCGGTAATCTATTAAGTTTGCTAGGGCTGAATGTTTCATATAATGATCTCAGTGGACCTCTCCCTTCTATTCCTTTATTTGAGCACATGTCATTAGACAGTTTTAGTGGAAATAAGTATCTATGTGGTGGACCTCTCGGAGAATGCAAACCTCACCCTTCATATCCTTCTCCAACTAAATTAAAAAGAGTACGGACTCGACTTGGCAAGATACTTGCTATAATTTCTGCAGCTATTGGAGGTCTTTCTCTTATTTTTATTGCTGTTATACTGCATTTCTTTAAAAGGTCTACTGAAACAATCGCCCCATTGCAAGAAAATAAGCTTTCTTCGGATTCGGATTTGAATGAATCTTCTAAAGAAGGGTTTGCATATGAAGAATTGGTTTCGGCTACAAGTAATTTTGATGAGAGTCTTGTCATAGGAAGAGGTGCTTGTGGGATTGTGTATAGAGCTACTATGCCTTCTGGCCTTATAATTGCCGTTAAAAAACTGATATCAAATAAAGAAGGGAGCAGTTCTGATAATAGTTTTCATGCAGAAATAGCAACTCTTGGAAAAATTAGGCACCGGAATATTGTGAAGTTGTATGGATTTTGTCATCATGAAGGATCAAATTTACTACTTTACGAGTTCATGCCAAATGGTAGCCTTGGTGAATTGCTTCATAGCAGTTCTAGTGATATTTTAGACTGGAATACACGCTATATGATTGCACTTGGATCAGCTGAAGGCCTTTCGTATTTGCATCATGATTGTCAACCTTGCATAATTCATAGAGATATTAAGTCAAACAATATACTTCTTGATAGTAATTTTGAAGCACACGTTGGAGATTTTGGGTTGGCAAAAGTGATAGATATGCCTCATTCTAAATCGATGTCTGTTGTTGCTGGATCTTATGGATATATAGCACCTGGTGAGACTTCATTTATTATATGTGTATATTAAATATTCGGAAACCATATTTGTGAACATATTAAAACTATTTTCTCATAGTACCTTGTATATACGCTTTCCTTCTCCTTTTCTAAGTTGTATATTTTGGATGCCTGAATACCTCTTCCTTGTTCATTCAATTGTCTTGACATAAGCTTCTCAAAGTGAAAACAATAAACCAATGAAAAAGAAAAAGCCTTAGTCATATACCATGAAGGTCCTAACACATCCTCTTGCTTGCAGAGTATGCATATACCATGAAGGTCACAGAAAAATGCGATATATATAGCTATGGTGTTGTACTATTAGAGCTACTAACTGGTAAGACGCCTGTTCAGCCTTTAGACAATGGAGGGGACCTGGTTTCATGGGTAAAAAGTTACGTTAACAAATATTCCTTTGGTTCTGGAGTTTTTGATAATCGTGTAACTTTAGGAGAACAAAATGTGGTTGATCATATGATCATGGTATTAAAAATTGCTTTGTTATGTACGAGTACGTCGCCTAGTGATAGACCACCTATGAGACAAGTTGTTGCCATGCTTGTTGAGTCCAAAGTGAAAAGGCAGGAAGCTTCCAGTTATCACTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008804749.1	4.3e-159	probable leucine-rich repeat receptor-like protein kinase At5g63930
Swissprot	Q9LVP0.1	1.6e-137	Probable leucine-rich repeat receptor-like protein kinase At5g63930
trEMBL	A0A8B8ZMR8	2.4e-159	probable leucine-rich repeat receptor-like protein kinase At5g63930

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G63930.1	62.23	3e-161	565		Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04024	AT5G63930.1	466	164	6	1	460	631	1090	62.23	3e-161	565
AfisC3G04024	AT5G63930.1	61	30	0	1	61	102	162	50.82	1e-08	57.8
AfisC3G04024	AT5G63930.1	61	33	0	1	61	126	186	45.90	4e-07	53.1

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	178	380	159.2	1.1e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0001944	P	vasculature development
GO:0005829	C	cytosol
GO:0004674	F	protein serine/threonine kinase activity
GO:0007169	P	transmembrane receptor protein tyrosine kinase signaling pathway
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005983	P	starch catabolic process
GO:0006351	P	transcription, DNA-templated
GO:0009414	P	response to water deprivation
GO:0009570	C	chloroplast stroma
GO:0009934	P	regulation of meristem structural organization
GO:0010030	P	positive regulation of seed germination
GO:0010067	P	procambium histogenesis
GO:0010080	P	regulation of floral meristem growth
GO:0010082	P	regulation of root meristem growth
GO:0010089	P	xylem development
GO:0010183	P	pollen tube guidance
GO:0010223	P	secondary shoot formation
GO:0010480	P	microsporocyte differentiation
GO:0016161	F	beta-amylase activity
GO:0033612	F	receptor serine/threonine kinase binding
GO:0043565	F	sequence-specific DNA binding
GO:0043621	F	protein self-association
GO:0046777	P	protein autophosphorylation
GO:0048229	P	gametophyte development
GO:0048833	P	specification of floral organ number
GO:0051301	P	cell division
GO:0090406	C	pollen tube
GO:0090558	P	plant epidermis development
GO:2000034	P	regulation of seed maturation

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20359	RABAC1, PRAF1; PRA1 family protein 1	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network