Detail information of AfisC3G04095


Location
GeneChrStartEndStrand
AfisC3G04095chr3731987138732024856-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020271866.17.1e-291calmodulin-binding transcription activator 6-like
SwissprotQ7XHR2.15.0e-233CaM-binding transcription factor
trEMBLA0A8K0I7511.6e-268Calmodulin-binding transcription activator CBT

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G16940.145.340.0 700calmodulin binding;transcription regulators

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag222598.t1; g533269.t1
Allium fistulosumAfisC3G04095
Allium sativumAsa2G03278.1
Arabidopsis thalianaAT3G16940.1; AT4G16150.1
Oryza sativaLOC_Os07g30774.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03859.13CG-1Domain33146149.92.2e-44
PF12796.4Ank_2Repeat52360632.96.6e-08
PF00612.24IQMotif74676418.90.00079
PF00612.24IQMotif76878719.20.00061
PF00612.24IQMotif85087015.40.01

Gene Ontology
AccessionOntologyName
GO:0003682Fchromatin binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005737Ccytoplasm
GO:0008134Ftranscription factor binding
GO:0014898Pcardiac muscle hypertrophy in response to stress
GO:0042826Fhistone deacetylase binding
GO:0043565Fsequence-specific DNA binding
GO:0044428Cnuclear part
GO:0045944Ppositive regulation of transcription from RNA polymerase II promoter
GO:0050885Pneuromuscular process controlling balance

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K21596CAMTA; calmodulin-binding transcription activatorEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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