result

Gene information

Detail information of AfisC3G04131

Location

Gene	Chr	Start	End	Strand
AfisC3G04131	chr3	738960441	738961547	-

Sequences

CDS

>AfisC3G04131
ATGAAGTGGCGACGTGGACCAATCATCGGCAAGGGTGCCTTCTCCACGGTGAATCTCGCCATCCTCAACAGCTTACCCATCGCCTGCAAATCCACGGACCTCCCAAACTCCTCCCTCCTCCTTCACGAAGAATCCATCCTAACCGACCTAAACAAAGACGACGACTGCCCCCACGTCATCAAATGCTTCGGCCACGACATCACCCATGAAGGCGGTTCAGATCTCTTCAACCTCTTCCTAGAGTACTTACCGGGCGGATACCTTAAGGGCCCTCTACCCGAACCCATTATCAAACGGCACACCCGCACCCTTCTAGAAGGACTGCACTCCATCCACTCCAAAGGGTACGTGCACTGCGACGTGAAGCCACGGAACCTCCTGATCGACTCCACCGGCAACTTGAAAATCGCCGACTTCGGACTTGCAAAGAAGCAGCACACAAAAACGGAACGGGCCTCTAATTTGTGTGGGACGCCGTTGTACATGTCTCCGGAAGCGGTCGCGGATGGAGAGTTGGAAGCGCCGATGGATGTGTGGGCGGTTGGGTGTGTGGTGGTGGAGATGTTTACCGGTGCGCCTGCTTGGGGCCCGGTAGAGGATGTGTGGGGGCTGATGATGAGGATCGCGTACGGGGATGAAGTTCCGGGTGTGCCCGATGGGTTGTCAGGCGAGGGTAAGGATTTTGTGAGGAGGTGCTTTGTTAGGGACCCGACCGAGAGGTGGACTGCCGAAATGCTGCTGAAACATCCATTTGTTGATGGGGATGGTGATTCAAAGAAGAAGAATGTGTCTCCGCAGAGTGTTTTTAAGTTTGATCATGAGAATTGCAGTTGTGATGAAGGATGGAGTGCAGCGAAAGATGGTGATGTACCTGATGATTTGAGTAAGCGGATTAAGGATTTGGCAATGGAGGATTACTGTAGATGTGATCGGTCCGATGATGATGATGAAGATGAAGGATGGATAAGAGTAAGAGGACAGAAGCACGCAGATGATGTTGACGATGCGATCATTAAACGGATACGGGATTTGGCTACCCATCCGAGTTGTTGTAAGTGTGACTTTGATGATGAAGGATGGATTACTGGAAGAGGAATCAATAAATAG

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_009396717.1	3.2e-72	PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like
Swissprot	Q9C5H5.1	1.6e-39	MAP3K gamma protein kinase
trEMBL	A0A804IPB3	2.3e-72	(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G36950.1	45.05	1e-63	240	MAPKKK21	mitogen-activated protein kinase kinase kinase 21

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04131	AT5G67080.1	276	125	6	1	257	1	274	47.10	9e-64	240
AfisC3G04131	AT4G36950.1	293	134	7	1	271	1	288	45.05	1e-63	240
AfisC3G04131	AT3G50310.1	304	134	7	1	272	1	301	44.41	5e-63	238

Ortholog group

Species	Genes
Allium cepa	g302942.t1; g325219.t1; g325220.t1; g325222.t1; g325234.t1; g325236.t1; g416625.t1; g416626.t1
Allium fistulosum	AfisC3G04131
Allium sativum
Arabidopsis thaliana	AT3G50310.1; AT4G36950.1; AT5G67080.1
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	6	252	157.8	2.9e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0000911	P	cytokinesis by cell plate formation
GO:0001568	P	blood vessel development
GO:0006915	P	apoptotic process
GO:0005829	C	cytosol
GO:0004709	F	MAP kinase kinase kinase activity
GO:0005634	C	nucleus
GO:0005935	C	cellular bud neck
GO:0030010	P	establishment of cell polarity
GO:0007349	P	cellularization
GO:0007584	P	response to nutrient
GO:0009555	P	pollen development
GO:0009791	P	post-embryonic development
GO:0010447	P	response to acidic pH
GO:0015630	C	microtubule cytoskeleton
GO:0030154	P	cell differentiation
GO:0030242	P	pexophagy
GO:0030968	P	endoplasmic reticulum unfolded protein response
GO:0032147	P	activation of protein kinase activity
GO:0032874	P	positive regulation of stress-activated MAPK cascade
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0043009	P	chordate embryonic development
GO:0043332	C	mating projection tip
GO:0043405	P	regulation of MAP kinase activity
GO:0044430	C	cytoskeletal part
GO:0044702	P	single organism reproductive process
GO:0046777	P	protein autophosphorylation
GO:0048367	P	shoot system development
GO:0048519	P	negative regulation of biological process
GO:0048568	P	embryonic organ development
GO:0048608	P	reproductive structure development
GO:0050793	P	regulation of developmental process
GO:0060237	P	regulation of fungal-type cell wall organization
GO:0060429	P	epithelium development
GO:0071323	P	cellular response to chitin
GO:0071902	P	positive regulation of protein serine/threonine kinase activity
GO:1900150	P	regulation of defense response to fungus
GO:2000071	P	regulation of defense response by callose deposition

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network