result

Gene information

Detail information of AfisC3G04250

Location

Gene	Chr	Start	End	Strand
AfisC3G04250	chr3	761991048	761992525	+

Sequences

CDS

>AfisC3G04250
ATGGAGGGACAGCAATCGTCATCTTCAAACGACATGCCATCCTCAGTCGACAACGTCAATGTTTCCTACTTGAGCAGTCTTGACCAGGAAGAAAAAGCGCTAGTGTCCCATATAAAAAATTACATCGCTCAGCTCAGCCGTATCCGTGAACAGAAACTCCGTACCACTCATTTAAATGTGGATGACCCAACCAGCTCAAAACAAGTCGCCTTCCTGAAATCCCAAACTGAAATGTTCAAAAACATGATAGAAATGATCGAATCAGACGACACTCAAGGCTTCGTGTATGGAATCATTACAAACAACGGAAAAATAGTTTCAGAAGCTTCTGAAAATCTGCGCAGTTGGTGGGAAAGCACCGTGCAGTTTGGATACAGAGGTCCTCAGGCTATTACTAAACACATCCTTGATAGTTTCACCTCTTCACCATCTCCCCTTCAAACAGCACCCGTCAACATAAGAGAGAAGCTCTCAGAAATATCAGACCCGACACTGAGCTCTCTGATCTCTGCTTTGATGCAGCACTGCAACCCTCCTCAGAAGCACCGTCCTTTCGAAATGAGGGTCCCACCTCCATGGTGGCCCAGCCCAAACGAGCCATGGTGGGCTGAGCTCGGTTTCTCTGACCTCGATCAGCCGCCTTACAAGAAGCCCCATGATTTGAAAAAGGTTTGCAAGGTCGCTCTACTCACCGCTATCATCTATCACTTGTCCCCTAACACTGATCATATCCGTGCACTTGTATGGCAGTCCAAAACCCTTCAAGAGAAGATGACTTCTAGGGATAATACAGTGTGGCTATCTGTTCTTGAACAGATAGATCGTCAAGCTTCGTTACAAGTAACCGGGTCCAGCTCTAATGAAGAAATCCGTAACATGTATAGTTTTGCTCCACAAGGTCAGGTGCCATTTATGCCTTTTACTTGTGCAAATGTTCGCTGCCCACATCATCTTATTGAAAATGGGTTCCCTAATCAACTGTTAAGAAATGCGCATCAGAATTCGTGTCCTTACAATATGCAGTTTGGCAGCAATCAGATGAATGCTGGAAATTTCGTGTATCACAATTACGGCAGCTTTGTTTATCATCCAAATGTGATGAGAAATGTGGATAATGGTTCTATGGCGCTGAACTTACAGGGTTTTCAGCAGCAGGTAAATGTGAATGGTGGTGGAGTTTGTTATCCAGGGATTGATCAGGCTGGTACGAGCGATGGAAGTCTTCAGAATTTGCAAGCTACTGCACCGGATATGATGGGTGCCATGAATGAATGGTTTCGACATAATATTTGA

Protein

Gene

>AfisC3G04250
GTCAAGATAAATATCATTTAATCTTGTTTGAAACTCATCTTAGCTAAAGTTTATGTTCACTGAATGGAAACTTCCTATTTCAACAAGGCATTGAATAAAATCTGCGGAAAAAATGGAGGGACAGCAATCGTCATCTTCAAACGACATGCCATCCTCAGTCGACAACGTCAATGTTTCCTACTTGAGCAGTCTTGACCAGGAAGAAAAAGCGCTAGTGTCCCATATAAAAAATTACATCGCTCAGCTCAGCCGTATCCGTGAACAGAAACTCCGTACCACTCATTTAAATGTGGATGACCCAACCAGCTCAAAACAAGTCGCCTTCCTGAAATCCCAAACTGAAATGTTCAAAAACATGATAGAAATGATCGAATCAGACGACACTCAAGGCTTCGTGTATGGAATCATTACAAACAACGGAAAAATAGTTTCAGAAGCTTCTGAAAATCTGCGCAGTTGGTGGGAAAGCACCGTGCAGTTTGGATACAGAGGTCCTCAGGCTATTACTAAACACATCCTTGATAGTTTCACCTCTTCACCATCTCCCCTTCAAACAGCACCCGTCAACATAAGAGAGAAGCTCTCAGAAATATCAGACCCGACACTGAGCTCTCTGATCTCTGCTTTGATGCAGCACTGCAACCCTCCTCAGAAGCACCGTCCTTTCGAAATGAGGGTCCCACCTCCATGGTGGCCCAGCCCAAACGAGCCATGGTGGGCTGAGCTCGGTTTCTCTGACCTCGATCAGCCGCCTTACAAGAAGCCCCATGATTTGAAAAAGGTTTGCAAGGTCGCTCTACTCACCGCTATCATCTATCACTTGTCCCCTAACACTGATCATATCCGTGCACTTGTATGGCAGTCCAAAACCCTTCAAGAGAAGATGACTTCTAGGGATAATACAGTGTGGCTATCTGTTCTTGAACAGATAGATCGTCAAGCTTCGTTACAAGTAACCGGGTCCAGCTCTAATGAAGAAATCCGTAACATGTATAGTTTTGCTCCACAAGGTCAGGTGCCATTTATGCCTTTTACTTGTGCAAATGTTCGCTGCCCACATCATCTTATTGAAAATGGGTTCCCTAATCAACTGTTAAGAAATGCGCATCAGAATTCGTGTCCTTACAATATGCAGTTTGGCAGCAATCAGATGAATGCTGGAAATTTCGTGTATCACAATTACGGCAGCTTTGTTTATCATCCAAATGTGATGAGAAATGTGGATAATGGTTCTATGGCGCTGAACTTACAGGGTTTTCAGCAGCAGGTAAATGTGAATGGTGGTGGAGTTTGTTATCCAGGGATTGATCAGGCTGGTACGAGCGATGGAAGTCTTCAGAATTTGCAAGCTACTGCACCGGATATGATGGGTGCCATGAATGAATGGTTTCGACATAATATTTGAACCTTTTTATTTTTATTTTTTAGCATTTAAACTTGCAGCTGCAGAAAAACAAATTGCTGTTACTGAATTGATT

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020253600.1	2.0e-65	protein ETHYLENE INSENSITIVE 3-like
Swissprot	Q10M41.1	1.2e-51	Protein MAO HUZI 6
trEMBL	A0A5P1FKJ4	1.4e-65	ETHYLENE INSENSITIVE 3-like 1 protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G20770.1	35.68	7e-55	211	AtEIN3;EIN3	Ethylene insensitive 3 family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04250	AT3G20770.1	370	159	9	44	338	61	426	35.68	7e-55	211
AfisC3G04250	AT5G10120.1	336	197	6	28	346	15	344	34.52	3e-52	202
AfisC3G04250	AT2G27050.1	273	156	4	2	272	29	296	40.29	3e-52	202

Ortholog group

Species	Genes
Allium cepa	g220666.t1
Allium fistulosum	AfisC3G04250
Allium sativum	Asa1G04366.1; Asa1G04389.1; Asa2G03414.1; Asa2G03416.1; Asa7G00201.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF04873.10	EIN3	Family	57	272	244.1	1.3e-72

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0000976	F	transcription regulatory region sequence-specific DNA binding
GO:0001666	P	response to hypoxia
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0042742	P	defense response to bacterium
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated
GO:0009873	P	ethylene-activated signaling pathway
GO:0042762	P	regulation of sulfur metabolic process
GO:0071281	P	cellular response to iron ion

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14514	EIN3; ethylene-insensitive protein 3	EC:-	MAPK signaling pathway - plant	ko04016
K14514	EIN3; ethylene-insensitive protein 3	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network