result

Gene information

Detail information of AfisC3G04296

Location

Gene	Chr	Start	End	Strand
AfisC3G04296	chr3	773248817	773250711	+

Sequences

CDS

Protein

Gene

>AfisC3G04296
ATGTTCAATTGGCGTCAGGGTAATACAGCAGCATATAGTTCACACTACAAAAGGTATGATACCCGCATTAGATTATTGTCAATTTTTTAACTTAAAAGTTAATGCCATGTTCTTCAAGTTATTTGTAATCCTATTTTTTTTAGAAAAAGCTCTACAAACAATAATGATGGAAGATCCTATAATGGACGCATTGCTACCGACGATCAAAGATTCGATGCCATCAGACGGGCAGTGAAATTTCAGTGCAGTTTAAAGGATTGTCATCCTTCTTTCACCAAGCCAATGGTTCGGTCCCATGTGTCTGGTTGCTTTTGGCTTGTAAGTTGTATCCTCGTTGCACCAATTTATCATATATGAATCAGTGATACCCTGAAAAGCTCTGCATTATAGTCTTGGATCTTTTTCTAGAAAGAAAGAAAAAAAAATCTAGCTTAACAGACATAGAGTATTACACTTCTTGCTATAAAGAAAAGATAATAGGCAGAGAAAATGTGGAGTCTTTTCCCACACTTTGATAATTTATAAGGTTTAAGAAAACATCAAATAACATAGTGTATGATTCCACATTGAATAATCAATATAATTGATCATGCTTCAATTGTAATAGATCACATACATGACCAACATATTTTGAAACAAAGTGGTTATGTGTTAGGGCATCAGATCAATGTCTATTCCATGTTTGTATCTAATAGTCATTCATGCTTATACAAAATTAAATGTCAATCTATTAGGCTTAAAGGTACATTACACGTGGTCGCATGTCATCCAAAGTTCTTGTGTTTGGCTTATAGACACCTCATGTGAGTAATATTGTTAAAAGTAGTCTAACATTTGGCAATTGATATAGTGAAATTTGTGTAAATAATAAGAGACAACTATCCACATTGTCGATTAGCTTTGTTTTAGGATGTATGTCGCTATGTGATAGTGGTATGTATTTAGATTGTTTACGTAGAGGTATTTGGATCAAATCCCATTGACATTCATTAACCATAATAAAAAATAAAAATAAAAATAAAAATTGTGATAATAATTGATTATCTAATATGCTATCAAAGCATGTAGTTGACCTCCACATGTGGAATGGAAGGGGTTGGTTTAAGATAAGCTATACATGAGGAATTATGTTAAGAATAGTCTTGCACTGAATGGTTAATATAATGGATCTTACACACACACACACACTTGTGTGTGTGTATTAAATCATATTCTTTGCATTGGCAATTCGTTTTGTAAATTTGCGATTAAGTTTGAAACTTTGAATCAAACTGTACAAAATAAAATAATGCATCCATCTAGATTTAGACAACGTTCTGGAGCTGTAGTGAATATAAATGGTTTGGATCATTCAGTTCATAACAATCAAATCAAAGAAGGATGTAAAAAAATGCTCAAAGTTTAAGGGCTGTCTATTCCATAACAGGTATATGTTGGGTGTATAATAATGAATACATATTTTGAAGTGTTTTTGTTTTAATGAATGAAGAACATGCCGAAACAATTCTGCAAGAATCACCTACCTGAAGAAGGGGAGTTGCAAATGGTATTAGAAGACGAAGAAGGAAAGGAATATGAGTCCAAATATCTAGCAAGGAAAAGTGGGCTCAGTGGCGGATGGCGAGGATTTTCAATAGCTCATGATCTGGAAGATGGAGATGCCTTGGTTTTTCAACTTGTTGCACCTGCAAGGTTCAAGGTATTGTATTGGTTTGCTTTCATTTTCTTGACCATTAACTCATGTCATTTTCCATTGCAACCAACTCTTAATATGAAATTTATTTCATCAAAACATGAATTGTTACTATTCTGCAATATTTTCTCAGGTCTACATCATAAAAGCAATTGAGGAAGAAATTGATAAATGCAATAGCAATGATGGGAAAAAAAAATAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020270382.1	2.1e-42	B3 domain-containing protein Os05g0481400-like
Swissprot	Q5KQI4.1	1.0e-38	B3 domain-containing protein Os05g0481400
trEMBL	A0A5P1FKR6	1.5e-42	TF-B3 domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G19184.1	54.20	6e-35	143		AP2/B3-like transcriptional factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04296	AT3G19184.1	131	56	2	35	165	104	230	54.20	6e-35	143
AfisC3G04296	AT5G42700.1	139	65	3	15	152	66	200	49.64	2e-32	134
AfisC3G04296	AT5G58280.1	122	59	1	33	154	99	219	50.82	2e-29	125

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF02362.18	B3	Family	61	151	63.6	1.1e-17

Gene Ontology

Accession	Ontology	Name
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005634	C	nucleus
GO:0006355	P	regulation of transcription, DNA-templated

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network