result

Gene information

Detail information of AfisC3G04322

Location

Gene	Chr	Start	End	Strand
AfisC3G04322	chr3	776787330	776790238	-

Sequences

CDS

>AfisC3G04322
ATGCTAGTACTCAATGATCAATTATATGATATCTTGAAACCTTCAGTGTTAATAATTATAATTTTCATTACCTGGTTGACATTGATATACTGCAAAAGAAATGTAAGCCAGAAATTGCCTCCAGGATCACTTGGGCTTCCAGTGATAGGTGAAACTTTGAGTTTCATGAAAGCTCTAAAAGCTGACAAGCTTAGTGAATGGATCAAAAATAGAGCATCGGTTAATGGAGTTATATTCAAAACTTCGGTTATTGGGAGCAATACTATTGTTATCACTGGAAGAGCCGGGAATAAGTTTATACTTAGTGCTACTGATGAAATTCTAAGTGTTAAACAGCCTCAATCAATTGTTAGGATTTCAGGGAAGCACAACATATTTGAACTCACGGGAGAAAGGTACAAAATAGTAAAAGGCGCAGTAATGGTGTTCCTCAAACCAGAAAGCCTTCAAGAATATGTCGGTAAAATGGATGCATTGGTCAAAACACAACTACTCAAAGAAACAAAAAAGGACACGATAATGGCTGTGCCATTAATCAAAAAAGTCACCTTCAACTTAACATGTACTCTACTGTTTAAGCTATATGATAATGAAACAAAGGAAACTCTGTTTGAGGATTTCACTCAAGTCCTAAAAGGATTGTGGGCTTTTCCATTTAATATATATGGAACAACTTATTATAAAGCACTTCAAGCAAGAGCTAGAATTGAGAAGAGAGTACAATCTATTATGAAAAGTAGAAAAATGGAACTGCTTGATGAGAAAATAAATGGCAAGGATGATTTGTTAACCAGTTTGATAACATTAAAAGATGAGAACAATGAATTGCTAAGAGATGAAGAAATTGTTGACAATTTTGTTACCTTAATGATTGCTAGTCACGATACAACTGCGATCTTGTTGAGCTTGTTAGTTTGGAAGTTGGCTAAAGATACCCATACCTACAACAAAGTTCTCGAAGAGCAAGAACAAATTTTAAGGGAGAGGCAGGATCCAAAGCAAGAAACGCTAACCTGGATAGAAGTACAGAAGATGAAATATACATGGCGAGTTGCACAGGAGCTAATGCGACAAATTCCTCCTGTATTTGGAAACTTCCGTAAAGCCATGAAAGACATCACATTTGGTGGTTATGATATACCTGAAGGATGGCAGGTATTTTGGGAGGCGACTGGGACACACATGGACAGTGATATCTTTGAAGACCCAAAAGGGTTTGACCCCTCGCGCTTCGAGAATCCATTAAGACCAGTTCCTCCATTTGCTTACATACCATTTGGATCGGGTCCTCGAATGTGCATAGGCAATGAATTTGCCAGGGTTGAGGTTCTCGTTGTGATACATCGGTTAGTTACTGACTTTGAATGGACTCTGATACATCCAGATGAGAAGATTACCCGAGAGCCGTTTCCTTATCCCTGTAAAGGATTGCCCATCAAGCTAATATCAAGAACACGTTAA

Protein

Gene

>AfisC3G04322
TACAAACTAAACAACTATGCTAGTACTCAATGATCAATTATATGATATCTTGAAACCTTCAGTGTTAATAATTATAATTTTCATTACCTGGTTGACATTGATATACTGCAAAAGAAATGTAAGCCAGAAATTGCCTCCAGGATCACTTGGGCTTCCAGTGATAGGTGAAACTTTGAGTTTCATGAAAGCTCTAAAAGCTGACAAGCTTAGTGAATGGATCAAAAATAGAGCATCGGTTAATGGAGTTATATTCAAAACTTCGGTTATTGGGAGCAATACTATTGTTATCACTGGAAGAGCCGGGAATAAGTTTATACTTAGTGCTACTGATGAAATTCTAAGTGTTAAACAGCCTCAATCAATTGTTAGGATTTCAGGGAAGCACAACATATTTGAACTCACGGGAGAAAGGTAAGTAAATCTTGCACAATCCAACTCTAAATTCATTATCTATTTACTCGTAAGACCGATGTCCACGGTGTGCCAGGCTTGGTCCAGGTCCAAGGCGACCAAGGTGGTCGAACCGGCCTCAAGTTTTTGATGTTTTTCAAAAGCCTCGTGCAATGAAGTTTTTAATTGTCCTTGAAGTTATAAATATCTAGATAAATTTTGCACAGTAATCTCAAAGAAAGTAAAGTTTGGTTTGTAAAAGCATCCTACATTGACCCTAAGAGATACAAGATTAGAACTCATGTTCAACAATTAACCAATTTAAATAGTTTTTAAATTTTGATTATATTTCACTGATTTAGCAAATAAGCTCATACTATATGCTAGGAGGGCCTAGAGTTGAGAAGCGGTCTTGGGCCACTTAATTCTAAGGGCTGGTCTTGCTTATTATATGTGATTCTAATTCAAAGTAATAATTAGTGAACTGCAAATAACTCGTTTTGGAATATCGAAAATTCAATTAAAAGCTAAAGTAACATAATTAGATAACATAATAGAAACTATAAAGCGAAACTTTTTTGACGTTCAAAAAGACTGCATCGAACCTTATGCAATTAGTTCCCTTTATTAATAGTAGAGATAATGCATTTCTTAAAATAAAAGGATAAACTAGCAGTGTATTGAAGAAGACATAATCAAAGACATGTAGAGATATAGCTGGCCTATGGGCTTTTAGAGATTTCAGATGTTTTAAAAAGACTGCATCAAACCTTATGCAATTAGTTCCCTTTATGAATAGTAGAGATAATGCATTTCTTAAAATAAAAGAAGACAATCAAAGACATGTAGAGATATAGCTGGCGTATGGGCTTTTAGAGATTTCGGATGTTTTAAAAAAAATGTTTTTTAGTACTCTAACGTCAACTAGACTTTATACCTTATAATGGCAGCTCTAATGCACTTTTTCTGACCTATATACAGTAATCTTTCTAATATATTTATCAGGTACAAAATAGTAAAAGGCGCAGTAATGGTGTTCCTCAAACCAGAAAGCCTTCAAGAATATGTCGGTAAAATGGATGCATTGGTCAAAACACAACTACTCAAAGAAACAAAAAAGGACACGATAATGGCTGTGCCATTAATCAAAAAAGTCACCTTCAACTTAACATGTACTCTACTGTTTAAGCTATATGATAATGAAACAAAGGAAACTCTGTTTGAGGATTTCACTCAAGTCCTAAAAGGATTGTGGGCTTTTCCATTTAATATATATGGAACAACTTATTATAAAGCACTTCAAGCAAGAGCTAGAATTGAGAAGAGAGTACAATCTATTATGAAAAGTAGAAAAATGGAACTGCTTGATGAGAAAATAAATGGCAAGGATGATTTGTTAACCAGTTTGATAACATTAAAAGATGAGAACAATGAATTGCTAAGAGATGAAGAAATTGTTGACAATTTTGTTACCTTAATGATTGCTAGTCACGATACAACTGCGATCTTGTTGAGCTTGTTAGTTTGGAAGTTGGCTAAAGATACCCATACCTACAACAAAGTTCTCGAAGGTAATACAAGTGAATATGATATCCAATATATTTTAATGTTATTTCTTTCTTGATAATGCTTATACAGAAAGGAAAGAAAACACCATATGCTTGAGTAATGAAACAACCAGTCAAGATATATTCATAAAAATATGTTATTAAAGGTTTTTTTTTTTTGTTTAAAGAGCAAGAACAAATTTTAAGGGAGAGGCAGGATCCAAAGCAAGAAACGCTAACCTGGATAGAAGTACAGAAGATGAAATATACATGGCGAGTTGCACAGGAGCTAATGCGACAAATTCCTCCTGTATTTGGAAACTTCCGTAAAGCCATGAAAGACATCACATTTGGTGGTTATGATATACCTGAAGGATGGCAGGTAAAATAATCAATGTTGAATTTCATATTACTGCCGCAACTATATAGCATAAATTAGTTTAATGTCGAACATAGCATAAAAGATAGAGAAGTATAAATAAGAACGATAACTTAATCATGCAGGTATTTTGGGAGGCGACTGGGACACACATGGACAGTGATATCTTTGAAGACCCAAAAGGGTTTGACCCCTCGCGCTTCGAGAATCCATTAAGACCAGTTCCTCCATTTGCTTACATACCATTTGGATCGGGTCCTCGAATGTGCATAGGCAATGAATTTGCCAGGGTTGAGGTTCTCGTTGTGATACATCGGTTAGTTACTGACTTTGAATGGACTCTGATACATCCAGATGAGAAGATTACCCGAGAGCCGTTTCCTTATCCCTGTAAAGGATTGCCCATCAAGCTAATATCAAGAACACGTTAAGAGTGATAAACACTTTTAATCAGTATACAATTTCTGTTTATATAAATATCAGTGAAGAAAGTTAGTTTGTGGTTAAGATTGTTCCAACACATGACGTTTCAGTTGCAGCATATTCAGTAATTTTTTTAGTATTCAATGAATAGTCGATATCTTGGAATGGAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010922745.1	9.2e-168	taxane 13-alpha-hydroxylase
Swissprot	Q6WG30.2	1.2e-95	Taxadiene 5-alpha hydroxylase
trEMBL	A0A8K0I529	6.4e-171	Taxane 13-alpha-hydroxylase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G36110.1	36.20	5e-84	308	CYP716A1	cytochrome P450, family 716, subfamily A, polypeptide 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04322	AT5G36110.1	453	274	7	39	485	34	477	36.20	5e-84	308
AfisC3G04322	AT2G42850.1	445	272	6	39	481	45	480	36.40	1e-79	293
AfisC3G04322	AT4G19230.1	478	306	7	15	484	4	462	30.33	7e-62	235

Ortholog group

Species	Genes
Allium cepa	g167084.t1
Allium fistulosum	AfisC3G04322
Allium sativum	Asa0G04446.1; Asa2G07470.1; Asa3G01485.1; Asa3G02632.1; Asa6G06529.1; Asa8G00346.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	40	469	220.3	3.7e-65

Gene Ontology

Accession	Ontology	Name
GO:0005488	F	binding
GO:0043231	C	intracellular membrane-bounded organelle
GO:0055114	P	oxidation-reduction process
GO:0036239	F	taxoid 7beta-hydroxylase activity
GO:0042616	P	paclitaxel metabolic process
GO:1901615	P	organic hydroxy compound metabolic process

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network