result

Gene information

Detail information of AfisC3G04368

Location

Gene	Chr	Start	End	Strand
AfisC3G04368	chr3	787480759	787483363	-

Sequences

CDS

Protein

Gene

>AfisC3G04368
CTTGATTCATAGCTTGACTGTTAAAAAAAGCCATTTTGATTTGGGATGGTTATTTCATAAATAGTTAAAAGATGACCACTTGTGTGTTGGGGAGATTCTATTGGAAATGCTTTATTTTACTTGGAGAATTAAATGTTCCTTTGACATCGAACAATGTGGGACTAATAACTTGTCTCTACATAAATAAAAGTGGTATAGCACTAACAGATATTAAGCAATCTAACATCTTGTTTTGCACAATTAAGTGGACTAGCACTAACAATTAAAAATCACAGCTAATCGCAGCATCTATTAAACGTTTATTTTTCCCCTCGTCTTGAAATATGTCCTCAAATCCTTCCCGCTACATTCGTTCCATTTCACCTTCCAATTAACTGTAAAACAAAATTAGTAAAAGAATTTCAGAAATTTTTCCCCCAAATCAAATTTCGAACTCTTTCAAATAAAATTCAAAAGAAATTTCTTATAACTTTTTGTTTGTCTCAAATCAAATTCAGCTTCCGTGCATTTCCTTTCCAGTTTTAGGTCCGTTTCCATTCAGATACAATATGTAGTTATATGTCTGATCAAATATCAATAAACATGATAAAACAGGCGCATCCATAGAAGAAAGAGGATGCATTGTTGCTTTCCATGTTGTTGTTGCTGGCGCAAAAGGAAAAAGAAGAACAAACGAGATAAGCAAGGAGGTAAACACAATATAACAAGGTTTAAGCATGCATTTCTTTATACGATGAATGCTAACCTATACAATTTATATGTTATGCAGAAAACTCAAAATCCAGGTCTGAAACAGCATTCACTAACGTGAATGGAAACATTCAAGCAAGAAGTTTCGCATTCCGGGAGCTTGCTTCAGCCACAAACAATTTCATGCCTGATTCACTTCTAGGCGAAGGTGGCTTTGGTAGAGTTTACAAAGGTTTCTTAGAAAACAGCGACAAGGTAGTATATTTATGTGTCTTAATCTACTCAAGTCACAGCATGTAATGTAAGCTATCTTCTTCTTTATATGTATCAGATTGTAGCAGTAAAACAACTAGACAGAAACGGACTTGAGGGCAACAGAGAGTTTCTAGTAAAAGTATTGATGCTTAGCTTTCTTCATCATCCAAACCTTGTAAAGCTTGTAGGATATTGCGCTGATGGAGAACAGCGTCTCTTGGTATATGAATTCATGACTAATGGCTCCTTACAGGACCATTTGTTCGGTAATATATAACATTTTCTTATGTTTTCTTCTTTTGATTCTAGATAAACTGTACACTGTTTGTAATTTTCCAGATCTTCAACCGAATCAAAGTCCATTAGATTGGTCAATGCGAATGAAGATAGCATACGGCGCCGCACAAGGTCTTGAGTATCTACACGACAAGGCAAACCCACCAGTTATATATGGTGATCTAAAATCATCAACTATTCTACTAGACGAACAATTAACGCCAAAACTATCGGATTTCGGACTGGTAAAACTAGGCCCAGTTGGAGATTTGCCAGTTGCTTCCTCAAGAGTTATGGGCACTTATGGCTATTGTGCTCCTGAGTATGCAAGGAGCGGAAATATCAGTTTGAAGTCCGATGTCTATAGCTTCGGTGTTGTTCTCTTAGAGCTGATTACTGGAAGAAGAGCTATAGATACTACCAAACCAACCAATGATCAAAATTTGATTACTTGGGTATGTACGTACTACCGATTCTTTCTTTTTGGTTTTGATATACATATAAACCGAACATTTTACTATTTCATACAGGTACAACCAATGTTTAAAGATCAGAAGAGATACAAAGAGCTGGTGGATCCAGCAATGGAAAACAACTACCCGTTAAAAGCGCTGAACCAAGCTGTTGCAATTGCAGCAATGTGCGTTCAAGAAGAACCATCGGTGCGCCCGTTCATGTCAGACGTAGTTGTGACATTGAGATTTTTAGCTGAGGCTTTTCCTTCATCTGAAGAAATGCCTTCATCGCCCGATCAGATTGAAGTGTCCCATAATTCGAATCCGAGTTTCAGTTTGTCTTACTCTTACAGTTCGGGCGATCACGTCATTGAATCTGCAACTAGTTCAAGAAGCTTGTAACATACTTTATGAATGATGTTAAGGTCAAAAAAGAGACTACTGTAAAAGATGTAGCAAGGAAATAGTAAATACATGGAAGCTACGTACTGGTTTGTGAAGGTATGAGAAAGCGACATGATGCTTCTGTATCGTTATCGTCACAGAAGATGATACCACTGTAAAATCGCTGCAGTATAGAGCTGATTCATTGACAGCGGCATCATCTCTTCTGCGACGATAACTTGCAAGCAAATTAATGGTGTTTTCTTCTTCTTCTTCTGGATATCCTTTTGTTTTCTCTGTCTGTAAGTTTATGTAAAACATTCACATGTTGCCTTAACCAATAATTGGTCCGACTGCGTTACTATTTATGTCGAGCGACAGTCATACGATTCATTGTGTGTGGCTTTCGTTTGTCAAATTGCAATTATTATTATGGAAATATCTATGTCATCTTTCCATCGTCACTGGCTCTATATTTGCATACGTACCATAAAGGATAAACTGAAGGTCATATTTTCTGCAATTTAAAAATCCAAAATGTTTTA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020113706.1	1.0e-76	probable serine/threonine-protein kinase PBL25
Swissprot	Q9SFT7.1	6.2e-71	PBS1-like protein 26
trEMBL	A0A199W6E2	7.3e-77	Serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G07070.1	59.57	2e-74	276		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
AfisC3G04368	AT3G07070.1	230	68	1	34	263	167	371	59.57	2e-74	276
AfisC3G04368	AT3G02810.1	228	68	4	36	261	154	354	57.46	4e-72	268
AfisC3G04368	AT3G24790.1	216	64	1	34	249	135	325	58.80	3e-71	265

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	44	160	79.5	2.3e-22

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0002221	P	pattern recognition receptor signaling pathway
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0046658	C	anchored component of plasma membrane
GO:0007166	P	cell surface receptor signaling pathway
GO:0009506	C	plasmodesma
GO:0009816	P	defense response to bacterium, incompatible interaction
GO:0009941	C	chloroplast envelope
GO:0010068	P	protoderm histogenesis
GO:0010183	P	pollen tube guidance
GO:0035420	P	MAPK cascade involved in innate immune response
GO:0042335	P	cuticle development
GO:0046777	P	protein autophosphorylation
GO:0048367	P	shoot system development
GO:0071323	P	cellular response to chitin
GO:0090404	C	pollen tube tip
GO:1900150	P	regulation of defense response to fungus
GO:1900426	P	positive regulation of defense response to bacterium
GO:1900459	P	positive regulation of brassinosteroid mediated signaling pathway
GO:1905393

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network